DRSC/TRiP Functional Genomics Resources

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Protein Alignment b6 and PTX3

DIOPT Version :10

Sequence 1:NP_477365.1 Gene:b6 / 31124 FlyBaseID:FBgn0024897 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_002843.2 Gene:PTX3 / 5806 HGNCID:9692 Length:381 Species:Homo sapiens


Alignment Length:292 Identity:62/292 - (21%)
Similarity:107/292 - (36%) Gaps:73/292 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GTAAYSL-KQSHPGAASSSHEISTSFSQFGGDKETTEVEDELLLG------RAAIVNGVDSSAAV 93
            |..|.|| :...|||.:              :...|...||||..      |.|.:.|.::....
Human    93 GRLAESLARPCAPGAPA--------------EARLTSALDELLQATRDAGRRLARMEGAEAQRPE 143

  Fly    94 SHPISFADHLED----QYESYSIEDEAPKE--------PLAFPRSPVYGSDRCSVKKFAFNQDGE 146
            ....:.|..||:    :.:.::::..|.:.        .:.||..        |.|.|     |.
Human   144 EAGRALAAVLEELRQTRADLHAVQGWAARSWLPAGCETAILFPMR--------SKKIF-----GS 195

  Fly   147 VEYGNPMPELDQFTICFWMRFTNHSGDHVLLTYEAGKEPREVQ--------IWVANAQNSSFLSM 203
            |....|| .|:.|:.|.|::.|:.....:|.:|...:.|.|:|        ::|...:.:..::.
Human   196 VHPVRPM-RLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQSIVFVVGGEENKLVAE 259

  Fly   204 AIKGQQMYRLNYPLKMRQWHHMCSSWNGKTGEWQAWLKAERIGRGFHNSLVGHKIPANGKLRSG- 267
            |:           :.:.:|.|:|.:||.:.|....|:..| :.........||.:|..|.|:.| 
Human   260 AM-----------VSLGRWTHLCGTWNSEEGLTSLWVNGE-LAATTVEMATGHIVPEGGILQIGQ 312

  Fly   268 ---GSSVTGEVSHGLHF--EMTLVQVYRVALS 294
               |..|.|.....|.|  .:|...::...||
Human   313 EKNGCCVGGGFDETLAFSGRLTGFNIWDSVLS 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
b6NP_477365.1 LamG 134..>264 CDD:473984 31/137 (23%)
PTX3NP_002843.2 CHAD 69..>165 CDD:444338 18/85 (21%)
PTX 175..381 CDD:128463 43/196 (22%)

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