Protein Alignment b6 and Apcs

DIOPT Version :10

• Sequence 1: NP_477365.1
• Gene: b6 / 31124
• FlyBaseID: FBgn0024897
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: NP_058866.2
• Gene: Apcs / 29339
• RGDID: 68322
• Length: 228
• Species: Rattus norvegicus
• Alignment Length: 178
• Identity: 38/178 - (21%)
• Similarity: 76/178 - (42%)
• Gaps: 29/178 - (16%)

  Fly   126 SPVYGSDRCSVKKFAFNQDGEVEYGNPMPELDQ----FTICFWMRFTNHSGDHVLLTYEAGKEPR 186
            |..:.....:.|.|.|.::.|.:|...:|.|::    ||:|| ..:::.|....|.:|.......
  Rat    16 SEAFAQTDLNQKVFVFPRESETDYVKLIPWLEKPLQNFTLCF-RAYSDLSRSQSLFSYSVNSRDN 79

  Fly   187 EVQIWVAN-AQNSSFL---SMAIKGQQMYRLNYPLKMRQWHHMCSSWNGKTGEWQAWLKAER-IG 246
            |:.|:... .|.|.::   .:.::|.:    .:|..:    |.|:||...:|..:.|:..:. :.
  Rat    80 ELLIYKDKVGQYSLYIGNSKVTVRGLE----EFPSPI----HFCTSWESSSGIAEFWVNGKPWVK 136

  Fly   247 RGFHNSLVGHKIPANGKLRSGGSSVTGEV--SHGLHFEMTLVQVYRVA 292
            :|...   |:.:      :|..|.|.|:.  ::|..|:.|...|..:|
  Rat   137 KGLQK---GYTV------KSSPSIVLGQEQDTYGGGFDKTQSFVGEIA 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
b6	NP_477365.1	LamG	134..>264	CDD:473984	28/138 (20%)
Apcs	NP_058866.2	PTX	21..224	CDD:128463	37/173 (21%)