DRSC/TRiP Functional Genomics Resources

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Protein Alignment b6 and Ptx3

DIOPT Version :10

Sequence 1:NP_477365.1 Gene:b6 / 31124 FlyBaseID:FBgn0024897 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_033013.3 Gene:Ptx3 / 19288 MGIID:104641 Length:381 Species:Mus musculus


Alignment Length:142 Identity:34/142 - (23%)
Similarity:63/142 - (44%) Gaps:11/142 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 GEVEYGNPMPELDQFTICFWMRFTNHSGDHVLLTYEAGKEPREVQIWVANAQNSSFLSMAIKGQQ 209
            |.|....|| :|:.|:.|.|::.|:.....:|.:|.....|.|:|:::    :|..|.:.:.|::
Mouse   194 GSVHPVRPM-KLESFSTCIWVKATDVLNKTILFSYGTKWNPYEIQLYL----SSQSLVLVVGGKE 253

  Fly   210 -MYRLNYPLKMRQWHHMCSSWNGKTGEWQAWLKAERIGRGFHNSLVGHKIPANGKLRSG----GS 269
             ....:..:.:.:|.|:|.:|:.:.|....|...|.:......: ..|.:|..|.|:.|    |.
Mouse   254 NKLAADTVVSLGRWSHLCGTWSSEQGSMSLWANGELVATTVEMA-KSHSVPEGGLLQIGQEKNGC 317

  Fly   270 SVTGEVSHGLHF 281
            .|.|.....|.|
Mouse   318 CVGGGFDESLAF 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
b6NP_477365.1 LamG 134..>264 CDD:473984 27/119 (23%)
Ptx3NP_033013.3 PTX 175..381 CDD:128463 34/142 (24%)

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