DRSC/TRiP Functional Genomics Resources

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Protein Alignment hfw and lron-1

DIOPT Version :9

Sequence 1:NP_001259135.1 Gene:hfw / 31120 FlyBaseID:FBgn0001189 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_510424.4 Gene:lron-1 / 181553 WormBaseID:WBGene00008093 Length:607 Species:Caenorhabditis elegans


Alignment Length:481 Identity:105/481 - (21%)
Similarity:193/481 - (40%) Gaps:103/481 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TTASSLAETQSMS-DPGSVTDTTSTSTSHS----TSTTSTTSPAPLPPAAPEQPEYLKHCFYAEE 145
            |..|:..|..|:: |.||..|....|.|:|    .|.|.:.:|....|....|...:|..|....
 Worm    28 TCTSTRYEAVSINCDGGSSLDAVLESLSNSPQAIDSLTISNTPIEKMPGYAFQGFQIKKLFLRNN 92

  Fly   146 QLCG---HTFDGRAETSEGQGSTVAQSEAQNRGGQGNSQCQCREHPTRPNSWYCCNISQLTMISS 207
            .|..   :||.|..|.|        ..|.:.||...:.         .|.|.... :.||.::|.
 Worm    93 GLRSFHPNTFTGNLENS--------LEELEIRGNYIDG---------IPQSGVSI-LKQLKILSL 139

  Fly   208 CSNISKWT------NLHVRNMTVEDMDLSNPIFRSLQSLAVTDGNITRL-VNAFPRLSALKCLNI 265
            ..|:.::.      :.|.|:              ||..|.::..|:|.: ......|..|..|::
 Worm   140 PDNLIEYVQDNAFLSYHSRD--------------SLLKLDLSANNLTAIHPTGLLGLENLSQLSL 190

  Fly   266 SNNNISEIHSRAVKDVPHLEFFGMSNNNLSLVPHRN----QNKNITLDISGNMRMLC------TP 320
            ..|.:|||.|:|::::|.||...:..|.:..:...:    ..|:::|::: .:|::.      ||
 Worm   191 DKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNSLPLPNLKSLSLEVN-QIRLIPSDSFSETP 254

  Fly   321 LNEIIY--------TESINFLN---PKHSYCQYNATHTWFQSTDKVSVEQLENRKRCVTNCPVIP 374
            |...:|        .::..||:   .|......|...|..|:..|:||:|.   |.|:       
 Worm   255 LLSYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANGKLSVQQF---KLCI------- 309

  Fly   375 NYGSCNCTLENIMIIQDNQSKPQCHV-DCSNLGLVELPQRLP--DNTFMLNITNNKITSLG-DYF 435
                  |    |:..|...|..:..: ||| :..:| |:.|.  .:..::.::.|:||.:. |.|
 Worm   310 ------C----ILAFQHAPSLIRLELFDCS-ISRIE-PKSLQKVQHIQVILLSRNQITRISHDTF 362

  Fly   436 HTNPTYHNINRLLADNNQISSIYEFEGTKFIETFQRIYMRNNSLSKIPEYFLNNALMD---SGLG 497
            ...|   .::.|....|.|:::.:|..:: :.....:.:.:|.|..:|...:.::||.   |.:.
 Worm   363 SNLP---ELSELDLSGNSINAVDDFAFSQ-LPMLTSLDLSSNRLESLPSNVIYDSLMQKKTSPVQ 423

  Fly   498 RRIYLAGNKLQCDCNSAKTLQNWLKE 523
            |::.:..|..:|| .....|:.||::
 Worm   424 RKLSIQNNPWRCD-KDLMWLRKWLRD 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hfwNP_001259135.1 LRR_8 235..294 CDD:290566 18/59 (31%)
leucine-rich repeat 237..259 CDD:275378 5/22 (23%)
leucine-rich repeat 260..283 CDD:275378 8/22 (36%)
leucine-rich repeat 284..304 CDD:275378 3/23 (13%)
leucine-rich repeat 420..443 CDD:275378 6/23 (26%)
leucine-rich repeat 444..465 CDD:275378 4/20 (20%)
leucine-rich repeat 466..497 CDD:275378 6/33 (18%)
leucine-rich repeat 498..509 CDD:275378 2/10 (20%)
lron-1NP_510424.4 PRK15370 <58..>289 CDD:185268 52/263 (20%)
leucine-rich repeat 85..109 CDD:275380 7/23 (30%)
leucine-rich repeat 110..133 CDD:275380 5/32 (16%)
leucine-rich repeat 134..157 CDD:275380 3/22 (14%)
leucine-rich repeat 161..184 CDD:275380 5/22 (23%)
leucine-rich repeat 185..208 CDD:275380 8/22 (36%)
leucine-rich repeat 209..231 CDD:275380 3/21 (14%)
leucine-rich repeat 232..255 CDD:275380 4/23 (17%)
leucine-rich repeat 256..279 CDD:275380 3/22 (14%)
leucine-rich repeat 280..319 CDD:275380 13/58 (22%)
leucine-rich repeat 320..343 CDD:275380 6/24 (25%)
LRR_8 343..402 CDD:338972 11/62 (18%)
leucine-rich repeat 344..367 CDD:275380 6/25 (24%)
leucine-rich repeat 368..391 CDD:275380 4/23 (17%)
leucine-rich repeat 392..410 CDD:275380 3/17 (18%)
leucine-rich repeat 414..435 CDD:275378 5/20 (25%)
LRRCT 431..>472 CDD:214507 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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