DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hfw and hfw

DIOPT Version :10

Sequence 1:NP_569933.2 Gene:hfw / 31120 FlyBaseID:FBgn0001189 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_003437043.1 Gene:hfw / 1271627 VectorBaseID:AGAMI1_006465 Length:650 Species:Anopheles gambiae


Alignment Length:624 Identity:240/624 - (38%)
Similarity:334/624 - (53%) Gaps:88/624 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPAALGEESTPHAHAHPQARHHHHAHPHAPLKEDEQGTAIPAPILTTD------NVGIGETTTA 88
            |..|..||.:......:|.:.|...:..........:..|...|::::.      |...|.:|.|
Mosquito    72 PVDAVGGEGADGGGGFNPASDHQPGSVDGGSAGRSTESFAATVPMVSSSSPASAPNGHAGSSTQA 136

  Fly    89 SSLAETQSMSD-PGSVTDTT------STSTSHSTSTTSTTS---------PAPLPP--------- 128
            |.|:.|.:... |.:||.||      |:||..||:||:|.:         |||...         
Mosquito   137 SPLSTTATPPPIPSAVTTTTGAPVASSSSTLASTTTTATATIAAGAPNVGPAPATATATSNGRSA 201

  Fly   129 -AAPEQPEYLKHCFYAEEQLCGHTFDGRAETSEGQGSTVAQSEAQNRGGQGNSQCQCREHPTRPN 192
             :||.|.|    |::|:.:||                      |:.:|     .|:|...|..|.
Mosquito   202 VSAPPQIE----CYHAQPELC----------------------AERKG-----DCECSVDPVVPA 235

  Fly   193 SWYCCNISQLTMISSC----SNISKWTNLHVRNMTVEDM--DLSNPIFRSLQSLAVTDGNITRLV 251
            :.||||::.:.....|    ...:.|..||:||:||.:|  ::||...::|.|||:|||.|.|:.
Mosquito   236 ALYCCNVTDINKAIGCVTNAPETASWKYLHIRNVTVREMALNVSNRYIKTLLSLAITDGTIQRIS 300

  Fly   252 NAFPRLSALKCLNISNNNISEIHSRAVKDVPHLEFFGMSNNNLSLVPHRNQNKNITLDISGNMRM 316
            .:|.|.|:..|||:||||||||..||.:::.:|....:|.||||.:|  :.|....|||.||:.|
Mosquito   301 TSFARFSSPVCLNVSNNNISEIEPRAFRELRNLTMLDLSYNNLSTIP--STNGKFRLDIRGNVGM 363

  Fly   317 LCTPLNEIIYTESINFLNPKHSYCQYNATHTWFQSTDKVSVEQLENRKRCVTNCPVIPNYGSCNC 381
            ||..|.|.: ...:.|.:|:.::|..|.|..||.|||.:.:.|||..:|....||     .:|.|
Mosquito   364 LCKSLLESL-KSGVKFKDPESTFCLTNRTFNWFNSTDSLPLHQLETIQRVQDECP-----ENCTC 422

  Fly   382 TLENIMIIQDNQSKP--QCHVDCSNLGLVELPQRLPDNTFMLNITNNKITSLGDYFHTNPTYHNI 444
            .|:.:....:|..:.  ...|.|:.|||.:.|.|||..|..|||:||.|||| :..:| |.|.::
Mosquito   423 ELDRLNFDLNNTERKTITTRVACTGLGLTKFPDRLPAGTVTLNISNNNITSL-EALNT-PPYQSL 485

  Fly   445 NRLLADNNQISSIYEFEGTKFIETFQRIYMRNNSLSKIPEYFLNNALMDSGLGRRIYLAGNKLQC 509
            .||.||:|||||:.:.||..||..|....:|.|.|..:..|....:|   .||..|:|.||.:.|
Mosquito   486 LRLHADDNQISSLSDLEGMDFISRFTLFSIRRNKLKTVQSYIFTKSL---DLGSYIFLEGNPMTC 547

  Fly   510 DCNSAKTLQNWLKERSSDIPDYMEIRCR---NMPQRVIELQEAKLCQSPPDWTDYIYYLIAAEVL 571
            |||:||..:|||..|.:.:||:..|.|.   |: |:::.:||:|||||..|||||||||||.|:|
Mosquito   548 DCNAAKGFKNWLLSRKAQVPDHENIFCEGNTNL-QQLVTIQESKLCQSQHDWTDYIYYLIATEIL 611

  Fly   572 LLLALITKVSYDYWVFKTAGYLPWPASKMPKLPCDWLCE 610
            ||:||:.|||||||||||||||||||:||||||||.|||
Mosquito   612 LLVALVCKVSYDYWVFKTAGYLPWPANKMPKLPCDCLCE 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hfwNP_569933.2 LRR <198..>313 CDD:443914 48/120 (40%)
leucine-rich repeat 237..259 CDD:275378 11/21 (52%)
leucine-rich repeat 260..283 CDD:275378 13/22 (59%)
leucine-rich repeat 284..304 CDD:275378 7/19 (37%)
leucine-rich repeat 420..443 CDD:275378 12/22 (55%)
leucine-rich repeat 444..465 CDD:275378 11/20 (55%)
leucine-rich repeat 466..497 CDD:275378 7/30 (23%)
leucine-rich repeat 498..509 CDD:275378 4/10 (40%)
hfwXP_003437043.1 LRR <237..>360 CDD:443914 54/128 (42%)
LRR <301..644 CDD:443914 159/347 (46%)
leucine-rich repeat 312..332 CDD:275380 7/19 (37%)
leucine-rich repeat 333..348 CDD:275380 6/14 (43%)
leucine-rich repeat 353..405 CDD:275380 20/51 (39%)
leucine-rich repeat 390..423 CDD:275380 12/32 (38%)
leucine-rich repeat 406..452 CDD:275380 12/47 (26%)
leucine-rich repeat 453..484 CDD:275380 16/30 (53%)
leucine-rich repeat 485..514 CDD:275380 14/28 (50%)

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