DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccdc141 and zormin

DIOPT Version :10

Sequence 1:NP_001417323.1 Gene:Ccdc141 / 311134 RGDID:1593250 Length:1530 Species:Rattus norvegicus
Sequence 2:NP_001261317.1 Gene:zormin / 2769001 FlyBaseID:FBgn0052311 Length:3664 Species:Drosophila melanogaster


Alignment Length:1866 Identity:342/1866 - (18%)
Similarity:664/1866 - (35%) Gaps:534/1866 - (28%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 TTVSSVAVQAGDSKIVIAVVKCGKWVRLQLAEAQPNLLEIGSSQDETRKLLHDHELLLAKLKALE 78
            ||:.:|.|:.|..::|||:::..:.:.:::.|.:|.:..:|.:.||:.::..:|:..|..|::|.
  Fly    95 TTIGTVVVRCGPIQLVIALLQSPEKIYIKVVELEPKITALGENLDESLRMQREHDETLRNLQSLP 159

  Rat    79 DRVWGLLQEADRTAEANKEQSEVYDAMAQTLGEAWATLVSMLERRRELLGLTSEFFQSALEFAIK 143
            ..:...:|:||:...:.:..||:.:|||.||...|..::::|:.|:.||.|.::|.....:...|
  Fly   160 GPMDEFVQKADKLLASKRISSELVNAMADTLNIIWQDILNLLQDRQHLLILCTQFHDKMTQCFRK 224

  Rat   144 IDQ----AEDFLQNPHEFESAEALQSLLLLHDRHAKELLERSLVLLNKSQQLTDFIEKFK----C 200
            :||    .|:.|..|    ....:|..|....:...::|...:..|....:|...:|:.:    .
  Fly   225 MDQLELACEETLHPP----DVPRVQEFLNRFKQLRIDMLTGVMAALKDGNELLAQLEELEKLETL 285

  Rat   201 DGSPVNSELIQGAQSSCLKIDSLLELLQDRRRQLDKHLQQQRQELSQVLQLCLWDQQESQVSCWF 265
            |..|  ..:.:.|..:..::...||.|.|||..|:...|.::.::.|.|.|.|..::...:....
  Fly   286 DTRP--EHIKRDATRAVHQVQQWLEALHDRRNSLELAWQTRKIQMEQCLALALLGRELVDLEAAL 348

  Rat   266 QKTIRDLQEQ-SLGSSLSDNKELIRKHEDLTIKAKEWDLAMEKLKSQALGILLSKD-------LT 322
            |:...:|... |||.......|::.|:       :||......|:.:||.|..:|:       .|
  Fly   349 QQARMELNTMYSLGECEHTANEMLTKY-------REWKQQALLLRDRALKITRAKEKVQSAGHFT 406

  Rat   323 EK--------------EHLQLSNQKLNRLQEEFGRLMVDRKAWLTMAHDFFTSANEAFDVLGKVE 373
            |:              |||.|.:|               |:.||..:.:||..|.....||.|:|
  Fly   407 EEDACARAYAVLSGCTEHLDLVDQ---------------REHWLHQSREFFAKAEHTVSVLEKLE 456

  Rat   374 DYLKLLKSEGLSLPALAAKHEELHREIKDSTAAALQKGRTLISQVDSCRAQVTGIHETMGRIQKR 438
            ..|..:|....| |...|...::.|::::.|...|:.|..::.:|...:.:..|:...:..::.|
  Fly   457 LELTSVKLPPHS-PESYAMFSKVDRDVRNFTEEPLRLGYGILDEVGRTQPETQGVKRVLDELENR 520

  Rat   439 VDRLSQQCTAHQEFALKKQQLATSVDDYLRKVEMSVQEMRL----VLATTLDVGSSPSESEKILN 499
            ...:...|....|   .:|::..::.::|......:..:|.    .|..::|:|.:..::::.|.
  Fly   521 KVYIQGICANSSE---DQQKVQRALSEFLNHHNELLAWLRASGQHQLQQSVDMGGNLQQAKQFLL 582

  Rat   500 KYLEL--DIQAK-ETAHALEAAAKITTEKNELELNEVALLPFKVKRLEEELSTLSRSVSYRSQVL 561
            ::.||  |::.| |..:.|..:.|:..|  .|...|...:..|.:.|.:....|...|..|...:
  Fly   583 QHHELMQDLEIKGELINLLLESIKVHLE--SLSPQERYDVDSKAESLHKHWIELKDLVLKRVDYV 645

  Rat   562 QTYIAFRKSSEEVEEQLQSLKEFYLTESPWEDEDDAVVTCQSNSAERKWQLFLKKSFL------- 619
            ...|.|.:.:.|:..||.:|:. .|.::|               .|.|.| ||:.::.       
  Fly   646 SLLIDFFELANELSSQLDNLQR-QLQQTP---------------DEHKLQ-FLQATWTGIASTFG 693

  Rat   620 -TQDLSLEFLNLISMAKENEILNVKKEMHIVENVMEKQTNGREELSRLRMAWHLKAMEGKPVKER 683
             .:.....|:||..:   :..|..|.....|:..:...:..:.:::.....|.....|.:.|:..
  Fly   694 ELKSRGQRFINLKIV---DPYLETKSSAQAVQETLNDFSKRQVDVTSSLENWTTSIAEKREVEYL 755

  Rat   684 WETFKEKLKKTTHNVKLLHEVLMPVSALDLGGNLQSMSDLRRRWIAMQPQLQQLHEDVQQIMKEW 748
            .|......::|......:...|.||.......:.|.:...|.:...:...:::..:::||.::..
  Fly   756 LEKVMSDNEETVAKSTQVDTQLYPVFTSQSVDSKQLLISTREKLTNVIQDIERAQDEIQQRIQTT 820

  Rat   749 EVLSGQGVPLKEKAEQLKDLIHLHQRQRERIQ-EYEEILYKTVQF-------------------- 792
            ..:..:..|...|.||:.:.:.:.:.:.:.|: :|..::...:||                    
  Fly   821 LGIQTKDQPSLAKIEQVINNLRMLKAKLDGIKYDYRTLVESVIQFLENIVQLRREIDDYFARQQK 885

  Rat   793 -----------------HQVKEELTHLIKPRELEL-LAQPMELEGSKEV----LMQL-------- 827
                             .|..::...||...||.: ..:.:|..|::|:    :::|        
  Fly   886 EPASGADRSIAEHEKFRDQCMDKFRSLITQSELLIDRVRVLEPPGAREIDTDRILKLLENLRLHF 950

  Rat   828 -GRSQGRRAHVDHLHRLALSLGVDIISSVQRPNCSNI--SAKSLQQQLEALELDSRDWSAKAK-- 887
             ..|..|.:.::.|.::          ...|.:..:|  |..|:.|||..:...|.|..|.||  
  Fly   951 ESNSSARMSTLERLEKI----------EQFRSDLEDIDRSLDSVSQQLHEINNQSVDSLAAAKTT 1005

  Rat   888 ----EY-EQVLACSLE-------------------------------------YCTTREEINELK 910
                || |:.:.||:.                                     :.|..|....:|
  Fly  1006 SLAFEYFERTIECSMPRQLKSTRHQRRWGQTAHTIELLEKRIEKFTESTSQQLFITNPESERYVK 1070

  Rat   911 ESFKDIKKKFNNLKFNYSKKNEKSRNLKTLQYQ-IQQVE-----------TYADKIQALRKKMEK 963
            :..:.:.:|:.:.| :..|:..||.|..|..:: :::::           :.::|:..||..:|.
  Fly  1071 DELRKLNEKWQSFK-DQVKQKRKSLNQATDFFEVVEKIDAEYREISYFYTSVSNKVPYLRDSVEA 1134

  Rat   964 VNKKISDSVLSYPSNKANTLVEAMEDLKKHVDDFDKVVTDY-----------KMNLDLT---EHL 1014
            .|  :.:.:.:|.:::...|...::...:...|.:||.:.|           |:.:|:.   |.|
  Fly  1135 GN--LVNDIENYVTSREAALRSKLDSASQCAHDMNKVSSLYNDVMNIFQSFIKLKMDINVVQERL 1197

  Rat  1015 QEVIEECNFWYEDASATVVRVGKYSMECQTREAVDILHRQFQKFVTPSVPQQEERIQEVVSLAQR 1079
            ::...:......||.....|    ....:..||.:.|||:.|..:      :.:|.|..:..|||
  Fly  1198 KQEQRQKEQRERDARDQAER----EKAIKEAEAKERLHREEQSRL------ENQRQQAAIEQAQR 1252

  Rat  1080 LYGLEEGQKYAEKIVTRHKEILESITELCGSLVELKEKLMQGDVPKVNSNLEDFHGNSIDLLKEP 1144
            .....| ....|:.|...:..|::|.|........:|:..:.:..::.| |.|......::..:.
  Fly  1253 ELAARE-LALREQAVREEEARLQAIREQATREQLAREQAAREEELRIQS-LRDIARREEEVRLQN 1315

  Rat  1145 GRDEQTTF---SEER------------SEGQAQGADVS--------------------------- 1167
            .|||:|..   .|||            .|.:.|..:::                           
  Fly  1316 IRDEETRIRREEEERIRRENESRSKREEEARIQREEITRLQTLRDQVDQQRIVTENIRKDIQVNS 1380

  Rat  1168 -------------------------------AINGTRE-------DGLPV----GLRQSFDK--- 1187
                                           .:.||.|       ||:.:    ..:.:|||   
  Fly  1381 IFTELRYASPLFTRPLKDAVSREGDRFVFECEVTGTPEPAVEWFKDGISIQTNSDYKTTFDKGIC 1445

  Rat  1188 -----------------------------------EDSAQGLTLPEDTL----SGEDSE------ 1207
                                               |::|:...:|...|    ||:.:|      
  Fly  1446 RLVIEETFAADSARFSCRASNLVGTCDTNATLSVRENAAEVQLVPPRILRFLQSGKATEGSSFQF 1510

  Rat  1208 -CISSDDISLPPLPV------------TPE----------------------------------- 1224
             |:    ::..|||.            :|:                                   
  Fly  1511 ACV----VAGVPLPTVQWFKNDKCIDDSPDYVISYNNGEATLKFEEVFLEDDAVYTCSASNPAGI 1571

  Rat  1225 ---------SPLAPSDMEVEEPASSSALALHISGYRMRTGTGGLGKAPESVLPPPTAFTDGYHNK 1280
                     .||.|:::...:...|:|:|......::....||        :|.|..:  ..||.
  Fly  1572 EHCSASLIVEPLEPTELPSFKVPLSNAMARVGQKIKLEAIVGG--------IPRPEVY--WLHNG 1626

  Rat  1281 K--DTFTSHFE---------RPYPQFKAEPLLTSRG-SGEMSTKLHVNVKCPARMPREVHDKALP 1333
            |  ....|.:|         :.||......:|:::. :||..|..:|.||  .|:|.|..|..: 
  Fly  1627 KPFQPRDSKYEYGRVTLIIPQAYPNDAGSYVLSAKNLAGEAYTSCNVIVK--GRLPNETSDSEM- 1688

  Rat  1334 PSSQAQEISLGTQEKVHADSNVTKTQDRLHAALDVSPGLSSQSDTSRSHQRQVGPQGDRKNSSAE 1398
                                           |.|:.|               :.|          
  Fly  1689 -------------------------------ASDIEP---------------IKP---------- 1697

  Rat  1399 KSVVSLAGQAPHFSRLLSNVTVTEGSPVTLEVEVTGFPEPTLTWFKKGQKLCADGHLQVLHKDTK 1463
                     |.|..  |.:|::.||.||.|:..:.|.|||.:.|:...:.:.....:|:|.:..:
  Fly  1698 ---------AVHLP--LKDVSIFEGKPVRLDCVIVGQPEPEVIWYHNERPVKESADVQLLFQGDR 1751

  Rat  1464 HSVFIPKVCEADAGLYVAQAQNSSGTLSSKAILHVTG-NHGPPITR 1508
            .|:.|.:|.:.|||.|...|.||:|..||...|.||. |...|.||
  Fly  1752 CSLIIQEVYQEDAGHYKVVAINSAGEASSSCELKVTPLNQAEPATR 1797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccdc141NP_001417323.1 Spectrin. /evidence=ECO:0000255 49..127 20/77 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1153..1240 28/272 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1259..1285 5/27 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1324..1356 3/31 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1369..1403 2/33 (6%)
zorminNP_001261317.1 SPEC 126..332 CDD:238103 50/211 (24%)
SPEC <504..641 CDD:413338 25/141 (18%)
SMC_prok_B 654..>1389 CDD:274008 124/779 (16%)
Smc <1192..>1377 CDD:440809 35/196 (18%)
I-set 1390..1479 CDD:400151 8/88 (9%)
Ig strand B 1407..1411 CDD:409564 0/3 (0%)
Ig strand C 1420..1424 CDD:409564 0/3 (0%)
Ig strand E 1445..1449 CDD:409564 0/3 (0%)
Ig strand F 1459..1464 CDD:409564 0/4 (0%)
Ig strand G 1472..1475 CDD:409564 0/2 (0%)
I-set 1491..1580 CDD:400151 9/92 (10%)
Ig strand B 1508..1512 CDD:409353 0/3 (0%)
Ig strand C 1521..1525 CDD:409353 0/3 (0%)
Ig strand E 1546..1550 CDD:409353 0/3 (0%)
Ig strand F 1560..1565 CDD:409353 0/4 (0%)
Ig strand G 1573..1576 CDD:409353 0/2 (0%)
I-set 1589..1675 CDD:400151 19/95 (20%)
Ig strand B 1606..1610 CDD:409353 0/3 (0%)
Ig strand C 1619..1623 CDD:409353 0/5 (0%)
Ig strand E 1641..1645 CDD:409353 0/3 (0%)
Ig strand F 1655..1660 CDD:409353 1/4 (25%)
Ig strand G 1668..1671 CDD:409353 1/2 (50%)
I-set 1702..1786 CDD:400151 28/85 (33%)
Ig strand B 1714..1718 CDD:409353 2/3 (67%)
Ig strand C 1727..1731 CDD:409353 0/3 (0%)
Ig strand E 1752..1756 CDD:409353 1/3 (33%)
Ig strand F 1766..1771 CDD:409353 1/4 (25%)
Ig strand G 1779..1782 CDD:409353 2/2 (100%)
I-set 1811..1902 CDD:400151
Ig strand B 1828..1832 CDD:409353
Ig strand C 1841..1845 CDD:409353
Ig strand E 1868..1872 CDD:409353
Ig strand F 1882..1887 CDD:409353
I-set 1927..2015 CDD:400151
Ig strand B 1944..1948 CDD:409353
Ig strand C 1957..1961 CDD:409353
Ig strand E 1981..1985 CDD:409353
Ig strand F 1995..2000 CDD:409353
Ig strand G 2008..2011 CDD:409353
Ig 2142..2231 CDD:472250
Ig strand B 2159..2163 CDD:409353
Ig strand C 2172..2176 CDD:409353
Ig strand E 2197..2201 CDD:409353
Ig strand F 2211..2216 CDD:409353
Ig strand G 2224..2227 CDD:409353
I-set 2238..2325 CDD:400151
Ig strand B 2255..2259 CDD:409353
Ig strand C 2268..2272 CDD:409353
Ig strand F 2309..2314 CDD:409353
PHA03247 <2593..2893 CDD:223021
I-set 3566..3655 CDD:400151
Ig strand B 3583..3587 CDD:409353
Ig strand C 3596..3600 CDD:409353
Ig strand E 3621..3625 CDD:409353
Ig strand F 3635..3640 CDD:409353
Ig strand G 3648..3651 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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