DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mur2B and cpg-1

DIOPT Version :9

Sequence 1:NP_001284789.1 Gene:Mur2B / 31111 FlyBaseID:FBgn0025390 Length:1795 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:527 Identity:123/527 - (23%)
Similarity:183/527 - (34%) Gaps:145/527 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   720 TTTKVTTTTQITTTTPLRSSTETTSTQPPTTTTPQPTTTTTLTVTPKTSTTTTTTEKPI----TS 780
            |:|:....::.||..|.....|.|:|.....|.|:.|||.........||||...:.|:    |:
 Worm   121 TSTQEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEAYAPVDDYSTTTPAEDVPVPVETTA 185

  Fly   781 SPKPTTTTQKTTSTAPN--TTKVAIT-----------------------TQKETTPTQSTSTTIF 820
            ||........|.:.|.:  .|:.|:|                       :.....|.|..:...|
 Worm   186 SPYAPIVPYTTGAPAADEPVTRSAVTKSCVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAF 250

  Fly   821 TRKT-----TTNNPEPT----STEKPITSTTPKPSTTTPKTSTVASSTEKTTISSPKPTTEK--- 873
            ....     ..|.||.|    :.|.....|||:.|...|.::..... |.||::...|:|:.   
 Worm   251 DEARVICDYVMNVPECTNGSGNDEGSADETTPESSGEMPYSNGYGYE-ETTTVAEDVPSTKDYAE 314

  Fly   874 ----------STENPTTNSVKTSALTSSTQRATSTTSEPTKTTQNITTTTPKPTTLKTSTQEATT 928
                      .:|..|..:|.|:.:....:...:|.....:||   ||...||..      |.||
 Worm   315 PIAAAYVARYPSEKTTAENVPTTTIGYEPEVVETTAPYVEETT---TTVGYKPEV------EETT 370

  Fly   929 STQKVSTVTI--------TTKKATESSPLTTLSTEEPNTT----PKPLRTTT----PTTTSVTAT 977
            :..:|.|.|:        ||....|.   ||.:.:.|:||    |:.:.|||    ||||:|...
 Worm   371 TEAEVPTTTVGYEPEIVETTAPYVEE---TTTAADVPSTTAVYEPEVVETTTEAEVPTTTTVGYE 432

  Fly   978 TRITTTTISESSTETTSTQKPKSTTPTSTTRTTPKVTTVIVSTQNPTTTTSKTSTVTITTPNPSP 1042
            ..:..||:......||:     :..||:|....|:|.......:.||||....|.|..||     
 Worm   433 PEVVETTVPYVEETTTA-----ADVPTTTVGYEPEVEETTTEAEVPTTTVGYESEVVETT----- 487

  Fly  1043 STQRPTTTTRQPTSITASTTSIGTTRIPTTTNPQNSTSSTDLTTVTRPPCPDPDSTSDKNTNTAC 1107
            :...||||......:..|||:   ..:||||.|..:|:..       |.|.:..:..:     .|
 Worm   488 AADIPTTTIGYAPIVVESTTA---ADVPTTTVPAETTTEV-------PACVEGATAIE-----PC 537

  Fly  1108 TQELQQVNLLELQSPQKQEQFTHTRTHTALTGSRNTLGGQEV-----------PDYMDDAPSSAE 1161
            :|..                             :|.:.|||.           |:....||:...
 Worm   538 SQHY-----------------------------KNCVNGQEAIFICENGLFFSPEQARCAPADQI 573

  Fly  1162 AESGQAT 1168
            ||..|.|
 Worm   574 AECHQTT 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mur2BNP_001284789.1 ChtBD2 88..136 CDD:214696
CBM_14 150..197 CDD:279884
CBM_14 221..275 CDD:279884
cpg-1NP_001021159.1 CBM_14 61..113 CDD:279884
CBM_14 214..266 CDD:279884 5/51 (10%)
CBM_14 <537..576 CDD:279884 10/67 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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