Sequence 1: | NP_001014714.1 | Gene: | Nmdar2 / 31107 | FlyBaseID: | FBgn0053513 | Length: | 1083 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077355.2 | Gene: | Grid2 / 79220 | RGDID: | 68368 | Length: | 1007 | Species: | Rattus norvegicus |
Alignment Length: | 965 | Identity: | 227/965 - (23%) |
---|---|---|---|
Similarity: | 387/965 - (40%) | Gaps: | 217/965 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 95 AANKEQLNIGLIAPHTNFGKREYLRSINNAVTGLTKT----RGAKLTFLKDYSFEQKNIHFDMMS 155
Fly 156 LTPSPTAILSTLCKEFLRVNVSAILYMMNNEQFG--HSTASAQY----FLQLAGYLGIPVISWNA 214
Fly 215 DNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERYKWHQFSVVTS---QIAGHDDFVQAVRERV 276
Fly 277 AEMQEHFKFTILNSIVVT-----RTSDLMELVNSEARVMLLYATQTEAITILRAAEEMKLTGENY 336
Fly 337 VWVVSQSVIEKKDA--------------HSQFPVG-------MLGVHFDTSSA-------ALMNE 373
Fly 374 ISNAIKIYSYGVEAYLTDPANR---DRRL-TTQSLSCEDEGRGRWDNGEIFFKYLRNVSIEGDLN 434
Fly 435 KPNIEFTADGDLRSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDI-AWPGNSHAPPQG 498
Fly 499 VPEKFHLKITFLEEAPYINLSPADPVSG--KCLMD-------RGVLCRVAADHE----MAADIDV 550
Fly 551 GQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVEDGKWGT-LENGKWNGLIADLVNRKTDM 614
Fly 615 VLTSLMINTEREAVVDFSEPFMETGIAIVVAKRTGIISPTAFLEPFDTASW-------MLVGIVA 672
Fly 673 IQAATFMIFLFEWLSPSGYDMKLYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRF 737
Fly 738 MTNVWALFAVVFLAIYTANLAAFM-ITREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDST 801
Fly 802 IHKYFNV----------MHNYM-RQYNKTSVAD--------GVAAVLNGNLDSFIYDGTVLDYLV 847
Fly 848 AQDEDCRLMTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLERLRRYW--MTGTCR--- 907
Fly 908 --PGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLEHVYFKYIRKRLAKKD 960 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar2 | NP_001014714.1 | PBP1_iGluR_NMDA_NR2 | 99..490 | CDD:107373 | 85/441 (19%) |
PBP2_iGluR_NMDA_Nr2 | 502..908 | CDD:270436 | 127/453 (28%) | ||
Lig_chan | 665..928 | CDD:278489 | 79/296 (27%) | ||
Grid2 | NP_077355.2 | Interaction with CBLN1 homotrimer. /evidence=ECO:0000250|UniProtKB:O43424 | 24..345 | 65/347 (19%) | |
Periplasmic_Binding_Protein_type1 | 28..429 | CDD:415822 | 88/479 (18%) | ||
PBP2_iGluR_delta_2 | 440..806 | CDD:270449 | 119/401 (30%) | ||
Interaction with AP4M1. /evidence=ECO:0000269|PubMed:14572453 | 921..991 | ||||
PDZ-binding. /evidence=ECO:0000250 | 1005..1007 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349998 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |