Sequence 1: | NP_001014714.1 | Gene: | Nmdar2 / 31107 | FlyBaseID: | FBgn0053513 | Length: | 1083 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062182.1 | Gene: | Grik2 / 54257 | RGDID: | 2733 | Length: | 908 | Species: | Rattus norvegicus |
Alignment Length: | 965 | Identity: | 224/965 - (23%) |
---|---|---|---|
Similarity: | 387/965 - (40%) | Gaps: | 213/965 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 118 LRSINNAVTGLTKTRGAKLTF------LKDYSFEQKNIHFDMMSLTPSPTAILSTLCKEFLRVNV 176
Fly 177 SAILYMMNNEQFGHS-TASAQYFLQLAGYLGIPVIS--WN---ADNSGLERRASQSTLQLQLAPS 235
Fly 236 IEHQSAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVR-ERVAEMQEHFKFTILNSIVVTRTSD- 298
Fly 299 ---LMELVNSEARVMLLYATQTEAITILRAAEEMKLTGENYVWVVS------------------- 341
Fly 342 -------------QSVIEKKDAHS-QFP----VGMLGVHFDTSSAALMNEISNAIKIYSYGVEAY 388
Fly 389 LTDPANRDRRLTTQSLSCEDEGRGR-WDNGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRS-AEL 451
Fly 452 KIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKF---HLKITFLEEA 513
Fly 514 PYINLSPAD-PVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEE 577
Fly 578 LGFTYELVRVEDGKWGTLE--NGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFMETGI 640
Fly 641 AIVVAKRTGIISP--TAFLEPFDTASWM--LVGIVAIQAATFMIFLF---EWLSPSGYDMKLYLQ 698
Fly 699 NTNVTPYRFSLFRTYWL-VWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMI 762
Fly 763 TREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHT--------DSTIHKYFNVMHNYMRQYNKT 819
Fly 820 SVADGVAAVLNGNLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLAFSRNSKYVQMFNKR 884
Fly 885 LLEFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLEHVYF 949
Fly 950 KYIRKRLAKKDGGHCCALI-----SLSMGKSLTFR---GAVFEATEILKKHRCND 996 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar2 | NP_001014714.1 | PBP1_iGluR_NMDA_NR2 | 99..490 | CDD:107373 | 91/427 (21%) |
PBP2_iGluR_NMDA_Nr2 | 502..908 | CDD:270436 | 110/427 (26%) | ||
Lig_chan | 665..928 | CDD:278489 | 58/276 (21%) | ||
Grik2 | NP_062182.1 | Periplasmic_Binding_Protein_Type_1 | 34..414 | CDD:299141 | 88/413 (21%) |
ANF_receptor | 52..395 | CDD:279440 | 85/394 (22%) | ||
Periplasmic_Binding_Protein_Type_2 | 430..800 | CDD:304360 | 109/419 (26%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:15721240, ECO:0000269|PubMed:17115050, ECO:0007744|PDB:1S50, ECO:0007744|PDB:1S7Y, ECO:0007744|PDB:2I0B, ECO:0007744|PDB:2I0C | 516..518 | 0/1 (0%) | |||
Lig_chan | 562..831 | CDD:278489 | 61/285 (21%) |