Sequence 1: | NP_001014714.1 | Gene: | Nmdar2 / 31107 | FlyBaseID: | FBgn0053513 | Length: | 1083 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001268858.2 | Gene: | Gria3 / 53623 | MGIID: | 95810 | Length: | 888 | Species: | Mus musculus |
Alignment Length: | 896 | Identity: | 206/896 - (22%) |
---|---|---|---|
Similarity: | 350/896 - (39%) | Gaps: | 214/896 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 148 NIHFDMMSLTPSPTAILSTLCKEFLRVNVSAILYMMNNEQFG-HSTASAQYFLQLAGYLGIPVI- 210
Fly 211 -SWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERYKWHQ----------FSV------- 257
Fly 258 -------VTSQIAGHDDFVQAVRERVAEMQEHFKFTILNSIVVTRTSDLME---LVNSEAR---V 309
Fly 310 MLLYATQTEAITILRAAEEMKLTG---------------ENYVWVVSQSVIEKKDAHSQFPVGML 359
Fly 360 GVHFDTSSAALMNEISNAIKIYSYGVEAYLTDPANRDRRLTTQSLSCEDEGRG---------RWD 415
Fly 416 NGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRSAELKIMNLRPSANNKNLVWEEIGVWKSWETQK 480
Fly 481 LDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMA 545
Fly 546 ADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVEDGKWGTL--ENGKWNGLIADLV 608
Fly 609 NRKTDMVLTSLMINTEREAVVDFSEPFMETGIAIVVAK----RTGIISPTAFLEPFDTASWMLVG 669
Fly 670 IVAIQAATFMIFLFEWLSPSGYDMKLYLQNTNV----------TPYRFSLFRTYWLVWAVLFQAA 724
Fly 725 VHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMITREEFHEFSGLNDSRLVHP------FS 783
Fly 784 HKPSFKFGTIPYSHTDSTIHK----YFNVMHNYMRQ-----YNKTSVADGVAAV--LNGNLDSFI 837
Fly 838 YDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLERLRRYWM 902
Fly 903 --TGTCRPGKQEHKSSD---PLALEQFLSAFLLLMAGILLAALLLLLEHVY 948 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar2 | NP_001014714.1 | PBP1_iGluR_NMDA_NR2 | 99..490 | CDD:107373 | 74/398 (19%) |
PBP2_iGluR_NMDA_Nr2 | 502..908 | CDD:270436 | 118/440 (27%) | ||
Lig_chan | 665..928 | CDD:278489 | 75/294 (26%) | ||
Gria3 | NP_001268858.2 | PBP1_iGluR_AMPA_GluR3 | 29..403 | CDD:380610 | 74/397 (19%) |
PBP2_iGluR_AMPA | 416..799 | CDD:270433 | 117/438 (27%) | ||
Glutamate binding | 502..504 | 0/1 (0%) |