Sequence 1: | NP_001014714.1 | Gene: | Nmdar2 / 31107 | FlyBaseID: | FBgn0053513 | Length: | 1083 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036704.1 | Gene: | Grik4 / 24406 | RGDID: | 2734 | Length: | 956 | Species: | Rattus norvegicus |
Alignment Length: | 979 | Identity: | 230/979 - (23%) |
---|---|---|---|
Similarity: | 402/979 - (41%) | Gaps: | 241/979 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 SGPISLL---LLTV--------LTLLILDTRSCQGLRLTNGGGSLSKGAAANKEQLNIGLIAPHT 110
Fly 111 NFGKREYLRSINNAVTGLTKTRGAKLTF--LKDYSFEQKNIHFDMM----------SLTPSPTAI 163
Fly 164 LSTLCKEFLRVNVSAILYMMNNEQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSTL 228
Fly 229 QLQLAPSIEHQSAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERVAEMQEHFK-FTILNSIV 292
Fly 293 VTRTSD--------LMELVNSEARVMLLYATQTEAITILRAAEEMKLTGENYVWVVS--QSVIEK 347
Fly 348 KDAHSQFPVGMLGVHFDTSSAALMNEISNAIK--------------------IYSYGVEAYLT-- 390
Fly 391 DPANRDRRLTTQSLSCEDEGRGR-WDNGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRSAELKIM 454
Fly 455 NLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFH---LKITFLEEAPYI 516
Fly 517 NLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFT 581
Fly 582 YELVRVEDGKWGTLE-NGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFMETGIAIV-- 643
Fly 644 --VAKRTGIISPTAFLEPFDTASW--MLVGIVAIQAATFMIFL---FEWLSP----SGYDMKLYL 697
Fly 698 QNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMI 762
Fly 763 TREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTI-------HKYFNVMHNYMRQYNK-- 818
Fly 819 ----TSVADGVAAVLNGNLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLAFSRNSKYVQ 879
Fly 880 MFNKRLLEFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLL 944
Fly 945 EHVY 948 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar2 | NP_001014714.1 | PBP1_iGluR_NMDA_NR2 | 99..490 | CDD:107373 | 87/436 (20%) |
PBP2_iGluR_NMDA_Nr2 | 502..908 | CDD:270436 | 122/435 (28%) | ||
Lig_chan | 665..928 | CDD:278489 | 71/284 (25%) | ||
Grik4 | NP_036704.1 | Periplasmic_Binding_Protein_type1 | 24..402 | CDD:415822 | 88/463 (19%) |
PBP2_iGluR_kainate_KA1 | 415..785 | CDD:270442 | 121/427 (28%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 931..956 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349685 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |