Protein Alignment Nmdar2 and W02A2.5

DIOPT Version :9

• Sequence 1: NP_001014714.1
• Gene: Nmdar2 / 31107
• FlyBaseID: FBgn0053513
• Length: 1083
• Species: Drosophila melanogaster
• Sequence 2: NP_502564.2
• Gene: W02A2.5 / 189098
• WormBaseID: WBGene00012190
• Length: 487
• Species: Caenorhabditis elegans
• Alignment Length: 463
• Identity: 93/463 - (20%)
• Similarity: 170/463 - (36%)
• Gaps: 116/463 - (25%)

  Fly   561 QC-CSGFCIDLLEKFAEELGFTYELVRVEDG------KWGTLE-NGKWNGLIADLVNRKTDMVLT 617
            || ..|:.:::|:...:.|  .:|::.|...      .||||: ||.|:|::..|.|...|.|..
 Worm    33 QCPFPGWTMEVLKMITDSL--KWEIIPVVTPTIVGGLDWGTLQKNGTWSGVLGYLQNGTADAVAL 95

  Fly   618 SLMINTEREAVVDFSEPFMETGIAIVVAKRT---GIISPTAFLEPFDTASWMLVGIVAIQAATFM 679
            .......|....::|.|........|..|:|   |.:...|| :||....|:.:      .|:.:
 Worm    96 MYQKTDTRNEYFEYSYPVTNVQPVFVARKKTETLGSVLWNAF-KPFSVEVWLCL------LASLV 153

  Fly   680 IFLFEWLSPSGYDMKLYLQNTNVTPYRFSLFRTYWLVWAVL-FQAAVHVDSPRGFT--SRFMTNV 741
            :.|...::.||.:.||..:         |.||.:.::|.|: .|.....|....:|  ...:..|
 Worm   154 LNLLIMIAISGIEFKLLFR---------SRFRPWEMLWHVVQLQLDEKSDDMLFYTLSGNIVLFV 209

  Fly   742 WALF-AVVFLAIYTANLAAFMITREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTI--- 802
            :||. :.:.:.:|...|...:||..                         |..|:::.|..|
 Worm   210 FALLQSGILIEVYKGMLLTALITSN-------------------------GDNPFANADEMIKLI 249

  Fly   803 -HKYFNVMHNYMRQY----------------------NKTSVADGVAAVLNGNLDSFIYDGTVLD 844
             .|.:::..|||..:                      |....|..|:|.|:      :.|.....
 Worm   250 GEKKYHLTTNYMGNWYFDDLQHSDQQHFVSLRAATASNPVIPAASVSAALD------LVDSGKYI 308

  Fly   845 YLVAQD--------EDCRLMTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLER-LRRY 900
            |.:.||        |.|..:.|............|::|...:..||.:::..:|  .::| ..:|
 Worm   309 YPIQQDSLAMQMSKERCNYVYVSDGMPQVSSFFVFTKNFSGIAEFNTQIIMNQA--FIQRTFNKY 371

  Fly   901 WMTG-------TCRPGKQEHKSSD---PLALEQFLSAFLLLMAGILLAALLLLLEHVYFKYIR-- 953
            :..|       .|.  ..|..:||   ||.:|..:..|.:...|:..:.::.:.|..::.::|
 Worm   372 FNEGFKLGFIPKCE--VTEPTASDATKPLDIESVIGVFTIGALGVAASLMVFVFEIYHYWHVRIL 434

  Fly   954 -KRLAKKD 960
             :|...:|
 Worm   435 ARRARMRD 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmdar2	NP_001014714.1	PBP1_iGluR_NMDA_NR2	99..490	CDD:107373
		PBP2_iGluR_NMDA_Nr2	502..908	CDD:270436	81/403 (20%)
		Lig_chan	665..928	CDD:278489	57/311 (18%)
W02A2.5	NP_502564.2	Lig_chan-Glu_bd	<36..86	CDD:214911	13/51 (25%)
		Periplasmic_Binding_Protein_Type_2	<74..>124	CDD:304360	12/49 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1052
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810