Sequence 1: | NP_001014714.1 | Gene: | Nmdar2 / 31107 | FlyBaseID: | FBgn0053513 | Length: | 1083 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001368711.1 | Gene: | glr-8 / 180924 | WormBaseID: | WBGene00001619 | Length: | 547 | Species: | Caenorhabditis elegans |
Alignment Length: | 484 | Identity: | 99/484 - (20%) |
---|---|---|---|
Similarity: | 181/484 - (37%) | Gaps: | 108/484 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 512 EAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAE 576
Fly 577 ELGFTYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFM--ETG 639
Fly 640 IAIVVAKRTGIISPTAFLEPFDTASWML-VGIVAIQAATFMIFLFEWLSPSGYDMKLYLQNTNVT 703
Fly 704 PYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMITREEFH 768
Fly 769 EFSGLND-SRLVHPFSHKPSFKFGTI----PYSHTD----STIHKYFNVMH----NYMRQYNKTS 820
Fly 821 VADGVA--------AVLN--GNLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLAFSRNS 875
Fly 876 KYVQMFNKRLLEFRANGDLERLRRYWMT-----------GTCRPGKQEHKSSDPLALEQFLSAFL 929
Fly 930 LLMAGILLAALLLLLEHVYFKYIRKRLAK 958 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar2 | NP_001014714.1 | PBP1_iGluR_NMDA_NR2 | 99..490 | CDD:107373 | |
PBP2_iGluR_NMDA_Nr2 | 502..908 | CDD:270436 | 85/432 (20%) | ||
Lig_chan | 665..928 | CDD:278489 | 55/297 (19%) | ||
glr-8 | NP_001368711.1 | PBP2_iGluR_ligand_binding | 62..424 | CDD:270219 | 84/419 (20%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |