DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdar2 and Nmdar2

DIOPT Version :10

Sequence 1:NP_001014714.1 Gene:Nmdar2 / 31107 FlyBaseID:FBgn0053513 Length:1083 Species:Drosophila melanogaster
Sequence 2:XP_061504088.1 Gene:Nmdar2 / 1275196 VectorBaseID:AGAMI1_003064 Length:910 Species:Anopheles gambiae


Alignment Length:914 Identity:772/914 - (84%)
Similarity:828/914 - (90%) Gaps:16/914 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 MMNNEQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSI 246
            |||.|.:|.||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Mosquito     1 MMNYESYGRSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSALQLQLAPSIEHQSAAMLSI 65

  Fly   247 LERYKWHQFSVVTSQIAGHDDFVQAVRERVAEMQEHFKFTILNSIVVTRTSDLMELVNSEARVML 311
            ||||||||||||||||||||||||||||:|..| :||||||||||:|||.|||:|||||||||||
Mosquito    66 LERYKWHQFSVVTSQIAGHDDFVQAVREQVGAM-DHFKFTILNSIIVTRPSDLLELVNSEARVML 129

  Fly   312 LYATQTEAITILRAAEEMKLTGENYVWVVSQSVIEKKDAHSQFPVGMLGVHFDTSSAALMNEISN 376
            ||.|::|||.||.||||:::|||||||||:|||||....|.|||:|||||||||||.||:|||:.
Mosquito   130 LYCTKSEAIEILHAAEELQITGENYVWVVTQSVIENTQTHPQFPIGMLGVHFDTSSGALVNEIAT 194

  Fly   377 AIKIYSYGVEAYLTDPANRDRRLTTQSLSCEDEGRGRWDNGEIFFKYLRNVSIEGDLNKPNIEFT 441
            ||::|:||||.||.|..|..|||.|..|||||:||||||:||:|||||||||:|.:.||||||||
Mosquito   195 AIRVYAYGVEYYLNDVKNTGRRLDTHQLSCEDQGRGRWDSGEVFFKYLRNVSLESESNKPNIEFT 259

  Fly   442 ADGDLRSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLK 506
            |||||:||||||||||||.|:|.|||||||:||||:.|||||||||||||||.||||||||||||
Mosquito   260 ADGDLKSAELKIMNLRPSVNSKGLVWEEIGIWKSWQQQKLDIRDIAWPGNSHTPPQGVPEKFHLK 324

  Fly   507 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLL 571
            |||||||||||||||||||||||||||||||||||||| .|||:||||:|.||||||||||||||
Mosquito   325 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEM-TDIDMGQAHKNGSFYQCCSGFCIDLL 388

  Fly   572 EKFAEELGFTYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFM 636
            |||||||||||||||||||||||||||||||||.:||||||||||||||||.|||||||||||||
Mosquito   389 EKFAEELGFTYELVRVEDGKWGTLENGKWNGLIHELVNRKTDMVLTSLMINAEREAVVDFSEPFM 453

  Fly   637 ETGIAIVVAKRTGIISPTAFLEPFDTASWMLVGIVAIQAATFMIFLFEWLSPSGYDMKLYLQNTN 701
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||..|||..
Mosquito   454 ETGIAIVVAKRTGIISPTAFLEPFDTASWMLVGIFAIQAATFMIFLFEWLSPSGYDMKTVLQNGQ 518

  Fly   702 VTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMITREE 766
            .|||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
Mosquito   519 TTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWAMFAVVFLAIYTANLAAFMITREE 583

  Fly   767 FHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTIHKYFNVMHNYMRQYNKTSVADGVAAVLNG 831
            ||||:||:||||.|||||||:.||||||:|||||||.|||..||.||:|||::||||||.|||:|
Mosquito   584 FHEFTGLDDSRLSHPFSHKPTIKFGTIPWSHTDSTISKYFKEMHYYMKQYNRSSVADGVTAVLSG 648

  Fly   832 NLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLER 896
            .||:||||||||||||.|||||||:|||.||||||||||||||||||.|||||||||||||||||
Mosquito   649 QLDAFIYDGTVLDYLVQQDEDCRLLTVGQWYAMTGYGLAFSRNSKYVGMFNKRLLEFRANGDLER 713

  Fly   897 LRRYWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLEHVYFKYIRKRLAKKDG 961
            |||:||||||||||||||||||||||||||||||||||||||||||||||:||||.||||||||.
Mosquito   714 LRRFWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLEHLYFKYFRKRLAKKDR 778

  Fly   962 GHCCALISLSMGKSLTFRGAVFEATEILKKHRCNDPICDTHLWKVKHELDMSRLRVRQLEKVMDK 1026
            |.|||||||||||||||||||:||||||::|||||||||||||||||||||||||.:.|||.|..
Mosquito   779 GGCCALISLSMGKSLTFRGAVYEATEILRRHRCNDPICDTHLWKVKHELDMSRLRNQHLEKTMQI 843

  Fly  1027 HGIKAPQLRLASSS------------DLLNHHHLKERPPLLGNLSLAASAQDLYRWSYKTEIAEM 1079
            ||||.||.:|.|::            ||::..:  ::|.|.||||:..|:|||||||||||||||
Mosquito   844 HGIKPPQPKLGSTNKIIRIAGTTGARDLIDDGY--QQPNLFGNLSIGGSSQDLYRWSYKTEIAEM 906

  Fly  1080 ETVL 1083
            ||||
Mosquito   907 ETVL 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nmdar2NP_001014714.1 PBP1_iGluR_NMDA_NR2 99..485 CDD:380601 244/302 (81%)
PBP2_iGluR_NMDA_Nr2 502..908 CDD:270436 368/405 (91%)
Nmdar2XP_061504088.1 None

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