Sequence 1: | NP_001014714.1 | Gene: | Nmdar2 / 31107 | FlyBaseID: | FBgn0053513 | Length: | 1083 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017948700.2 | Gene: | grin2b / 100490580 | XenbaseID: | XB-GENE-949327 | Length: | 1449 | Species: | Xenopus tropicalis |
Alignment Length: | 996 | Identity: | 302/996 - (30%) |
---|---|---|---|
Similarity: | 484/996 - (48%) | Gaps: | 148/996 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 147 KNIH----FDMMSLTP----------SPTAILSTLCKEFLRVNVSAILYMMNNEQFGHSTASAQY 197
Fly 198 FLQLAGYLGI----PVISWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERYKWHQFSVV 258
Fly 259 TSQIAGHDDFVQAVRERVAEMQEHFKFTILNSIVVTRTSDLMELVNS---------------EAR 308
Fly 309 VMLLYATQTEAITILRAAEEMKLTGENYVWVVSQSVIEKKD-AHSQFPVGMLGVHFDTSSAALMN 372
Fly 373 EISNAIKIYSYGVEAYLTDPANRDRRLTTQSLSCEDEGRGRWDNGEIFFKYLRNVSIEGDLNKPN 437
Fly 438 IEFTADGDLRSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEK 502
Fly 503 FHLKITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNES----FYQCC 563
Fly 564 SGFCIDLLEKFAEELGFTYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINTEREAV 628
Fly 629 VDFSEPFMETGIAIVVAKRTGIISPTAFLEPFDTASWMLVGIVAIQAATFMIFLFEWLSPSGYDM 693
Fly 694 KLYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLA 758
Fly 759 AFMITREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTIHKYFNVMHNYMRQYNKTSVAD 823
Fly 824 GVAAVLNGNLDSFIYDGTVLDYLVAQDEDCRLMTVGSW--YAMTGYGLAFSRNSKYVQMFNKRLL 886
Fly 887 EFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLEHVYFKY 951
Fly 952 IRKRLAKKDGGHC----CA-----LISLSMGKSLTFRGAVFEATEILKKHRCNDP---ICDTHLW 1004
Fly 1005 KVKHELDMSRLRVRQLEKVMDKHGIK-APQLRL------ASSSDLLNHH---------------- 1046
Fly 1047 ----HLKERPPLLGNLSLAAS 1063 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar2 | NP_001014714.1 | PBP1_iGluR_NMDA_NR2 | 99..490 | CDD:107373 | 92/376 (24%) |
PBP2_iGluR_NMDA_Nr2 | 502..908 | CDD:270436 | 167/411 (41%) | ||
Lig_chan | 665..928 | CDD:278489 | 100/264 (38%) | ||
grin2b | XP_017948700.2 | PBP1_iGluR_NMDA_NR2 | 28..383 | CDD:380601 | 91/371 (25%) |
PBP2_iGluR_NMDA_Nr2 | 400..800 | CDD:270436 | 167/411 (41%) | ||
NMDAR2_C | 837..1449 | CDD:402274 | 31/157 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 221 | 1.000 | Domainoid score | I2551 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 452 | 1.000 | Inparanoid score | I1565 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D279143at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000775 | |
OrthoInspector | 1 | 1.000 | - | - | otm48169 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.070 |