DRSC/TRiP Functional Genomics Resources

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Protein Alignment sta and RPSAb

DIOPT Version :10

Sequence 1:NP_476750.1 Gene:sta / 31106 FlyBaseID:FBgn0003517 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_850515.1 Gene:RPSAb / 819637 AraportID:AT3G04770 Length:332 Species:Arabidopsis thaliana


Alignment Length:193 Identity:122/193 - (63%)
Similarity:152/193 - (78%) Gaps:0/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPS 72
            :|.||.||..||.|..|||::|.|:|||:||:|||.||:.|:||||||:|||:|||.||||:||.
plant    13 VSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPK 77

  Fly    73 DIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEA 137
            ||.|.|:||.|||||||||:||....||||.|||.||||:|.:|.|||||::|||.||||||.|.
plant    78 DIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEG 142

  Fly   138 SYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVD 200
            :..|||.|||.:||||:.::||.||.|||..||||.::|||||.||::||||..:.:|.|:|:
plant   143 ALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staNP_476750.1 PTZ00254 1..247 CDD:240331 122/193 (63%)
RPSAbNP_850515.1 uS2_euk_arch 15..204 CDD:273394 120/188 (64%)

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