DRSC/TRiP Functional Genomics Resources

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Protein Alignment sta and rps002

DIOPT Version :9

Sequence 1:NP_001284785.1 Gene:sta / 31106 FlyBaseID:FBgn0003517 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_594413.1 Gene:rps002 / 2543293 PomBaseID:SPAPJ698.02c Length:287 Species:Schizosaccharomyces pombe


Alignment Length:287 Identity:149/287 - (51%)
Similarity:187/287 - (65%) Gaps:43/287 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNP 71
            :|:..:|||..:|.|.:|:||:|:..:||.||:|||:||::|:|||||||||.||||.|..|:||
pombe    10 VLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIATIENP 74

  Fly    72 SDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIME 136
            :|:.||||||.|.|||||||.:|..|.||||||||.|||.|...:|||||::||||..|.|.|.|
pombe    75 ADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTDPRADAQAIKE 139

  Fly   137 ASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDL 201
            ||:|||||||..:|||.|.::|:|||.|||...||||.|:|||||||||||.|||:..|.|:.||
pombe   140 ASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEVMPDL 204

  Fly   202 FFYRDPEEAEKEE------AAAKELLPPPKIEEAVDHPVEETTNWADEVAAETVGG---VEDWNE 257
            :|||||||.|:||      |||.|       |||             ::||:|...   |.|...
pombe   205 YFYRDPEEIEREEEQKAAAAAAAE-------EEA-------------QLAAQTAAAEFEVTDSAA 249

  Fly   258 DTV--------------KTSWGSDGQF 270
            .||              :|:|..|.::
pombe   250 GTVDPTILDNATAGQVGQTTWEGDAEW 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staNP_001284785.1 PTZ00254 1..247 CDD:240331 140/245 (57%)
rps002NP_594413.1 PTZ00254 5..210 CDD:240331 125/199 (63%)
RPS2 17..209 CDD:294223 122/191 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 131 1.000 Domainoid score I1316
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68249
Inparanoid 1 1.050 280 1.000 Inparanoid score I674
OMA 1 1.010 - - QHG53661
OrthoFinder 1 1.000 - - FOG0003206
OrthoInspector 1 1.000 - - otm47270
orthoMCL 1 0.900 - - OOG6_100806
Panther 1 1.100 - - LDO PTHR11489
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2274
SonicParanoid 1 1.000 - - X2156
TreeFam 00.000 Not matched by this tool.
1212.000

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