DRSC/TRiP Functional Genomics Resources

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Protein Alignment sta and Rpsa

DIOPT Version :10

Sequence 1:NP_476750.1 Gene:sta / 31106 FlyBaseID:FBgn0003517 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_035159.3 Gene:Rpsa / 16785 MGIID:105381 Length:295 Species:Mus musculus


Alignment Length:282 Identity:173/282 - (61%)
Similarity:203/282 - (71%) Gaps:20/282 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65
            |||.||:|.:||:|:.|.|.|.||||..|::||||||:|||::||:.|:||.:|||||.||||||
Mouse     1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65

  Fly    66 VAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTD 130
            |||:||:|:.|||||..|||||||||..|..||||||||||.||||||.|||||||||||||..|
Mouse    66 VAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRAD 130

  Fly   131 HQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEW 195
            |||:.||||||:|.||..||||||||:|||||||||.|||:|||||:|||||||:||||||...|
Mouse   131 HQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPW 195

  Fly   196 PVVVDLFFYRDPEEAEKEEAAAKE------------LLPPPKIEEAVDHPVEETTNWADEVAAET 248
            .|:.||:|||||||.||||.||.|            ..|.|:...|  .|  |..:|::.|...:
Mouse   196 EVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTAA--QP--EVADWSEGVQVPS 256

  Fly   249 VG----GVEDWNEDTVKTSWGS 266
            |.    ..|||:.......|.:
Mouse   257 VPIQQFPTEDWSAQPATEDWSA 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staNP_476750.1 PTZ00254 1..247 CDD:240331 168/257 (65%)
RpsaNP_035159.3 PTZ00254 1..250 CDD:240331 167/252 (66%)
Interaction with PPP1R16B. /evidence=ECO:0000255|HAMAP-Rule:MF_03016 54..113 46/58 (79%)
Laminin-binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03016 161..180 15/18 (83%)
Laminin-binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03016 205..229 12/23 (52%)
[DE]-W-[ST] 1 230..232 0/1 (0%)
Laminin-binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03016 242..295 9/39 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..295 3/13 (23%)

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