DRSC/TRiP Functional Genomics Resources

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Protein Alignment sta and Mrps2

DIOPT Version :10

Sequence 1:NP_476750.1 Gene:sta / 31106 FlyBaseID:FBgn0003517 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_006497688.1 Gene:Mrps2 / 118451 MGIID:2153089 Length:337 Species:Mus musculus


Alignment Length:245 Identity:51/245 - (20%)
Similarity:85/245 - (34%) Gaps:87/245 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 ESTVFISFGSVIRSYE--MPDNFKAGII-----KMFKSLPDVTFI--------------WKYEK- 343
            |:..:::.|   :|||  |.||.|.|.:     |:.||:..|.|.              ||:.: 
Mouse   170 ETLTYLNQG---QSYEIRMLDNRKMGDVPEISGKLVKSIIRVVFHDRRLQYTEHQQLEGWKWNRP 231

  Fly   344 DDVKFQNRLPKNVHLKKWVPQPSLL--------ADKRVKLFV------------THGG-LGSTME 387
            .|......:|.:|.:......||.|        ..||...|:            .||| .|....
Mouse   232 GDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFR 296

  Fly   388 V-----------AYTG---KPALMVPIFGDQPNNADMLARHGGAVAYDKFDLADGEKLTKTVRDM 438
            :           .||.   ..:..:.:|  :|..||...::            |.||:.|  |..
Mouse   297 IQVDTFKQNENGEYTDHLHSASCQIKVF--KPKGADRKQKN------------DREKMEK--RTA 345

  Fly   439 VTNSKYEVNAQELLKVLSKQPIDPKLNLMKHLEFAMEFPKHRSQ---VPA 485
            ....||:.:..  ..:|::..::|      .:|.|:|..:.:|.   :||
Mouse   346 HEKEKYQPSYD--TTILTEMRLEP------IIEDAVEHEQKKSSKRTLPA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staNP_476750.1 PTZ00254 1..247 CDD:240331
Mrps2XP_006497688.1 RPS2 127..302 CDD:100106 30/134 (22%)
Blue background indicates that the domain is not in the aligned region.

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