DRSC/TRiP Functional Genomics Resources

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Protein Alignment rush and fgd4b

DIOPT Version :10

Sequence 1:NP_569923.2 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_073802990.1 Gene:fgd4b / 793364 ZFINID:ZDB-GENE-110421-6 Length:776 Species:Danio rerio


Alignment Length:208 Identity:54/208 - (25%)
Similarity:93/208 - (44%) Gaps:27/208 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LVGEGVLTKMCRKRPKS--RQFFLFNDILVYGNIVIGKKKYNKQHIMPLEEVSLESI----ADNQ 94
            |:.||.:.|:..:...|  |..||||::|:|   .:.|.....|.......|.:|.:    ..|:
Zfish   432 LIKEGQILKLAARNTSSMERYLFLFNNMLLY---CVPKFSLVGQRFTVRTRVRVEGMKVLETSNE 493

  Fly    95 TYRNGWYIRTTTKSFVVFAATSTEKQEWMAHINKCVEDLLRKS--------------GKKPVENH 145
            .|.:.:.:....::..:.|::..:|::|:....:.:|...:|:              .|:.:...
Zfish   494 DYPHTFQVSGKERTLELQASSQQDKEDWIKAFQETIEIFQQKNETFKSACKEATDEVSKEELGKR 558

  Fly   146 AAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQQSTKALRVCDACYER 210
            |..|:.|.:.::||.||:......:||||||.||.|||..||..|..|...|.|..:||..||  
Zfish   559 APRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGYVVCYKCSDHKASLRYDSNKLNKVCKDCY-- 621

  Fly   211 LKHVPSSLGSGED 223
              |:.:.....|:
Zfish   622 --HILTGRADAEE 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rushNP_569923.2 PH_Phafin2-like 7..129 CDD:269927 21/98 (21%)
FYVE_PKHF 148..208 CDD:277257 25/59 (42%)
fgd4bXP_073802990.1 None

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