DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rush and plekhf2

DIOPT Version :9

Sequence 1:NP_001284784.1 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001016121.1 Gene:plekhf2 / 548875 XenbaseID:XB-GENE-959911 Length:248 Species:Xenopus tropicalis


Alignment Length:253 Identity:154/253 - (60%)
Similarity:191/253 - (75%) Gaps:7/253 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVDRLVNSEANTRRIASVENCFGSSGVPLAMQGRVLVGEGVLTKMCRKRPKSRQFFLFNDILVYG 65
            |||||.|||||::||..||:|||::|.|||:.||||:|||||||:|||:||:|||||||||||||
 Frog     1 MVDRLANSEANSKRINLVESCFGTAGQPLAIPGRVLIGEGVLTKLCRKKPKARQFFLFNDILVYG 65

  Fly    66 NIVIGKKKYNKQHIMPLEEVSLESIADNQTYRNGWYIRTTTKSFVVFAATSTEKQEWMAHINKCV 130
            ||||.|||||||||:|||.|::::|.|....||||.|:|.||||.|:|||:|||.|||.||||||
 Frog    66 NIVIQKKKYNKQHIIPLENVTIDTIEDEGELRNGWLIKTPTKSFAVYAATATEKSEWMNHINKCV 130

  Fly   131 EDLLRKSGKKPVENHAAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQ 195
            .||:.||||.|...|||||:||::|::||.|||.:||.:.||||||.||.|:|..||.|::|||.
 Frog   131 CDLISKSGKTPNSEHAAVWIPDSEATICMRCKKVKFTPVNRRHHCRKCGYVICGPCSEKRYLLPS 195

  Fly   196 QSTKALRVCDACYERLKH--VPSSLGSGEDSAAATGAASGNKLNTTAGDSSNDEDSDE 251
            ||:|.:||||.||:.|.:  ..|.|.|..||.:....:..|     ..|..:||||.:
 Frog   196 QSSKPVRVCDFCYDLLSNGDFSSCLPSRSDSFSHPSKSKNN-----LSDDDDDEDSSD 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rushNP_001284784.1 PH_Phafin2-like 7..129 CDD:269927 87/121 (72%)
PH 39..131 CDD:278594 68/91 (75%)
FYVE_PKHF 148..208 CDD:277257 35/59 (59%)
plekhf2NP_001016121.1 PH_Phafin2-like 7..129 CDD:269927 87/121 (72%)
FYVE_PKHF2 148..211 CDD:277294 37/62 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 149 1.000 Domainoid score I4397
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11620
Inparanoid 1 1.050 324 1.000 Inparanoid score I2460
OMA 1 1.010 - - QHG52283
OrthoDB 1 1.010 - - D1237900at2759
OrthoFinder 1 1.000 - - FOG0002686
OrthoInspector 1 1.000 - - oto104838
Panther 1 1.100 - - LDO PTHR46280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2928
SonicParanoid 1 1.000 - - X3637
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.