DRSC/TRiP Functional Genomics Resources

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Protein Alignment rush and Plekhf2

DIOPT Version :9

Sequence 1:NP_001284784.1 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001102125.1 Gene:Plekhf2 / 362484 RGDID:1312029 Length:249 Species:Rattus norvegicus


Alignment Length:256 Identity:159/256 - (62%)
Similarity:192/256 - (75%) Gaps:11/256 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVDRLVNSEANTRRIASVENCFGSSGVPLAMQGRVLVGEGVLTKMCRKRPKSRQFFLFNDILVYG 65
            |||||.|||||||||:.||:|||::|.||.:.||||:|||||||:|||:||:|||||||||||||
  Rat     1 MVDRLANSEANTRRISIVESCFGAAGQPLTIPGRVLIGEGVLTKLCRKKPKARQFFLFNDILVYG 65

  Fly    66 NIVIGKKKYNKQHIMPLEEVSLESIADNQTYRNGWYIRTTTKSFVVFAATSTEKQEWMAHINKCV 130
            ||||.|||||||||:|||.|:::||.|....||||.|:|.||||.|:|||:|||.|||.||||||
  Rat    66 NIVIQKKKYNKQHIIPLENVTIDSIKDEGELRNGWLIKTPTKSFAVYAATATEKSEWMNHINKCV 130

  Fly   131 EDLLRKSGKKPVENHAAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQ 195
            .|||.||||.|...||||||||::|:|||.|:|.:||.:.||||||.||.|||..||.|:||||.
  Rat   131 SDLLSKSGKTPSNEHAAVWVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFLLPS 195

  Fly   196 QSTKALRVCDACYERLKHVPSSLGSGEDSAAATGAAS---GNKLNTTAGDSSNDEDSDEET 253
            ||:|.:|:||.||:.|        |..|.||.....|   ...|.:...|:|:|:|.|:.:
  Rat   196 QSSKPVRICDFCYDLL--------STGDMAACQPTRSDSYSQSLKSPLNDASDDDDDDDSS 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rushNP_001284784.1 PH_Phafin2-like 7..129 CDD:269927 89/121 (74%)
PH 39..131 CDD:278594 69/91 (76%)
FYVE_PKHF 148..208 CDD:277257 37/59 (63%)
Plekhf2NP_001102125.1 PH_Phafin2-like 7..129 CDD:269927 89/121 (74%)
PH 39..131 CDD:278594 69/91 (76%)
FYVE_PKHF2 148..211 CDD:277294 39/62 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352248
Domainoid 1 1.000 152 1.000 Domainoid score I4238
eggNOG 1 0.900 - - E1_KOG1729
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11620
Inparanoid 1 1.050 329 1.000 Inparanoid score I2374
OMA 1 1.010 - - QHG52283
OrthoDB 1 1.010 - - D1237900at2759
OrthoFinder 1 1.000 - - FOG0002686
OrthoInspector 1 1.000 - - oto98152
orthoMCL 1 0.900 - - OOG6_105889
Panther 1 1.100 - - LDO PTHR46280
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3637
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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