DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rush and zfyve26

DIOPT Version :9

Sequence 1:NP_001284784.1 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_002937253.3 Gene:zfyve26 / 100492179 XenbaseID:XB-GENE-1005056 Length:2555 Species:Xenopus tropicalis


Alignment Length:121 Identity:42/121 - (34%)
Similarity:54/121 - (44%) Gaps:31/121 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KKPVENHAAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQQSTKALRV 203
            |.|.:..   |:||.....||.||..:||...||||||.||.:||:.||.|:.::........||
 Frog  1815 KPPAKTQ---WIPDEREVTCMVCKNERFTMFNRRHHCRRCGRLVCSSCSMKRMVVEGCRENPARV 1876

  Fly   204 CDACYERLKHVPSSLGSGEDSAAATGAASGNKLNTTAGDSSNDEDSD-EETASPGG 258
            ||.|:                  |..:|:.||:         ||||| .|...|||
 Frog  1877 CDQCH------------------AYFSANINKM---------DEDSDYTEAERPGG 1905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rushNP_001284784.1 PH_Phafin2-like 7..129 CDD:269927
PH 39..131 CDD:278594
FYVE_PKHF 148..208 CDD:277257 26/59 (44%)
zfyve26XP_002937253.3 FYVE_ZFY26 1822..1882 CDD:277263 27/77 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1237900at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.