DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rush and rufy1

DIOPT Version :10

Sequence 1:NP_569923.2 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_002667361.2 Gene:rufy1 / 100330077 ZFINID:ZDB-GENE-090421-4 Length:697 Species:Danio rerio


Alignment Length:104 Identity:40/104 - (38%)
Similarity:59/104 - (56%) Gaps:10/104 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 QEWMAHINKC---VEDLLRKSGKKPVENHAAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAV 181
            ||...|:::.   :||.  |...|.::.||  |:.|.:|:.|..|:| :|:..:|:|||||||.:
Zfish   601 QEMGLHLSQSKLKMEDF--KEVNKALKGHA--WLKDDEATQCKQCQK-EFSISRRKHHCRNCGDI 660

  Fly   182 VCAGCSAKKFLLPQQSTKALRVCDACYERLKHVPSSLGS 220
            .|..||:.:..||.. .|.:||||.|:..|.. .||.||
Zfish   661 YCGNCSSNELALPSY-PKPVRVCDVCHSLLLQ-RSSTGS 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rushNP_569923.2 PH_Phafin2-like 7..129 CDD:269927 3/8 (38%)
FYVE_PKHF 148..208 CDD:277257 25/59 (42%)
rufy1XP_002667361.2 RUN 101..257 CDD:459241
Smc <317..>559 CDD:440809
FYVE_RUFY1 624..694 CDD:277297 29/74 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.