Protein Alignment Rab27 and SEC4

DIOPT Version :9

• Sequence 1: NP_726743.1
• Gene: Rab27 / 31103
• FlyBaseID: FBgn0025382
• Length: 236
• Species: Drosophila melanogaster
• Sequence 2: NP_116650.1
• Gene: SEC4 / 850543
• SGDID: S000001889
• Length: 215
• Species: Saccharomyces cerevisiae
• Alignment Length: 182
• Identity: 74/182 - (40%)
• Similarity: 120/182 - (65%)
• Gaps: 12/182 - (6%)

  Fly    14 AGSGEQF------LVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHL 72
            :|:|:.:      |::|||||||:|||.::.:.:|:..||:|:||||:.|.:..|.:    ::.|
Yeast    11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK----KVKL 71

  Fly    73 QIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKC 137
            |:||||||||||::|||:||.|||.:|::|:|.|::|.....|...:..|| :::..::|.|||.
Yeast    72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA-NDEAQLLLVGNKS 135

  Fly   138 DLLQLRVVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIEN 189
            | ::.|||:.||..||.:...:|:||:||....||.|....|...:.|:|::
Yeast   136 D-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab27	NP_726743.1	P-loop_NTPase	19..187	CDD:304359	71/173 (41%)
		RAB	20..186	CDD:197555	70/171 (41%)
SEC4	NP_116650.1	Rab8_Rab10_Rab13_like	18..183	CDD:206659	70/170 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910