DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RABE1e

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_187601.1 Gene:RABE1e / 820148 AraportID:AT3G09900 Length:218 Species:Arabidopsis thaliana


Alignment Length:178 Identity:75/178 - (42%)
Similarity:112/178 - (62%) Gaps:6/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||:|||.:::|..|.|.||:|:||||:.:.:..:.:    ||.||||||||||||
plant    17 KLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGK----RIKLQIWDTAGQERF 77

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQ-LRVVSR 147
            |::|||:||.|||.||::|:|.|.||....||:..:..|| |:..:.:|.|||.|:.: .|.|..
plant    78 RTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHA-SDSVNKILVGNKADMDESKRAVPT 141

  Fly   148 DQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNRE 195
            .:..||...|.:.:.||||.|..||::....:...:.:|:..:....|
plant   142 SKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAE 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 73/168 (43%)
RABE1eNP_187601.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 73/167 (44%)

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