DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RAB6A

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_181989.1 Gene:RAB6A / 819069 AraportID:AT2G44610 Length:208 Species:Arabidopsis thaliana


Alignment Length:155 Identity:63/155 - (40%)
Similarity:94/155 - (60%) Gaps:5/155 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.:.|||..||||.::.::...:|...:.:|:||||..|.:....|    .:.||:|||||||||
plant    11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR----TVRLQLWDTAGQERF 71

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            |||..::.||:...::::|:.|.:|||.|..|:.::||...| |..|||.|||.||:..|.||.:
plant    72 RSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGS-DVIVVLVGNKTDLVDKRQVSIE 135

  Fly   149 QVAALCRRYRLPYIETSACTGANVK 173
            :..|..|...:.:|||||..|.|:|
plant   136 EAEAKARELNVMFIETSAKAGFNIK 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 63/155 (41%)
RAB6ANP_181989.1 Rab6 10..170 CDD:206654 63/155 (41%)

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