DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RAB27A

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_004571.2 Gene:RAB27A / 5873 HGNCID:9766 Length:221 Species:Homo sapiens


Alignment Length:207 Identity:116/207 - (56%)
Similarity:149/207 - (71%) Gaps:23/207 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLY------NSRGRRHRIHLQIWDT 77
            :||.|||||||||.:|||||||:|:::||:||||||||||::|      .:.||..|||||:|||
Human    11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDT 75

  Fly    78 AGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQL 142
            |||||||||||||:||||||||:||||:|:|||...||:|||:.|||.|:||:||||||.||...
Human    76 AGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQ 140

  Fly   143 RVVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFSLLLTQSRCLP 207
            |||..::..||..:|.:||.||||..|.|:.:|:|:|:..:|:|:|               ||:.
Human   141 RVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRME---------------RCVD 190

  Fly   208 NIAYGQPEDLVR 219
            ....  ||.:||
Human   191 KSWI--PEGVVR 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 108/173 (62%)
RAB27ANP_004571.2 Rab27A 6..185 CDD:206700 108/173 (62%)
Effector region. /evidence=ECO:0000250 38..46 6/7 (86%)

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