DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab37

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_067386.3 Gene:Rab37 / 58222 MGIID:1929945 Length:223 Species:Mus musculus


Alignment Length:228 Identity:90/228 - (39%)
Similarity:126/228 - (55%) Gaps:27/228 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 APPEPEPLQLAGSGEQFLVLGDSGVGKTCLLYQYTDGRFHT-QFISTVGIDFREKRLLYNSRGRR 67
            :||......|.|   :.::||||||||||.|.|:.||.|.: .||:|||||||.|.:..:..   
Mouse    19 SPPFSPNYDLTG---KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGA--- 77

  Fly    68 HRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSE-DPDVV 131
             |:.||||||||||||||:|.|:||||...||::|:|::.||.....||:::  |.|:: |..::
Mouse    78 -RVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEI--HEYAQRDVVIM 139

  Fly   132 LCGNKCDLLQLRVVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREF 196
            |.|||.|:...||:..:....|.|.|.:|::||||.||.||:.|...:...:..|     ..|: 
Mouse   140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYR-----AGRQ- 198

  Fly   197 SLLLTQSRCLPNIAYGQPEDLVRLHDRREEPCS 229
                      |:....|..|.|....:|...||
Mouse   199 ----------PDEPSFQIRDYVESQKKRSSCCS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 77/169 (46%)
Rab37NP_067386.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 1/2 (50%)
Rab26 31..220 CDD:206695 84/210 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 52..67 8/14 (57%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 85..102 13/16 (81%)

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