DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab27a

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_059013.1 Gene:Rab27a / 50645 RGDID:620918 Length:221 Species:Rattus norvegicus


Alignment Length:207 Identity:114/207 - (55%)
Similarity:147/207 - (71%) Gaps:23/207 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSR------GRRHRIHLQIWDT 77
            :||.|||||||||.:|||||||:|:::||:||||||||||::|.:.      ||..|||||:|||
  Rat    11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDT 75

  Fly    78 AGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQL 142
            |||||||||||||:||||||||:||||:|:|||...||:|||:.|||.|:||:||||||.||...
  Rat    76 AGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQ 140

  Fly   143 RVVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFSLLLTQSRCLP 207
            |.|..::...|..:|.:||.||||..|.|:.:|:|:|:..:|:|:|               ||:.
  Rat   141 RAVKEEEARELAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRME---------------RCVD 190

  Fly   208 NIAYGQPEDLVR 219
            ....  ||.:||
  Rat   191 KSWI--PEGVVR 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 106/173 (61%)
Rab27aNP_059013.1 Rab27A 6..185 CDD:206700 106/173 (61%)
Effector region. /evidence=ECO:0000250 38..46 6/7 (86%)

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