DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RAB8A

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_005361.2 Gene:RAB8A / 4218 HGNCID:7007 Length:207 Species:Homo sapiens


Alignment Length:170 Identity:74/170 - (43%)
Similarity:116/170 - (68%) Gaps:5/170 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||||:|:::::..|::.||||:||||:.:.:..:.:    ||.||||||||||||
Human    10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGK----RIKLQIWDTAGQERF 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            |::|||:||.|||.:|::|:|:||||....||:..:..|| |.|.:.::.|||||:...|.||::
Human    71 RTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA-SADVEKMILGNKCDVNDKRQVSKE 134

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIE 188
            :...|...|.:.::||||....||:.|...|...:..:::
Human   135 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 74/167 (44%)
RAB8ANP_005361.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/166 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 13/16 (81%)

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