DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab8

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster


Alignment Length:170 Identity:76/170 - (44%)
Similarity:116/170 - (68%) Gaps:5/170 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||||:|:::::..|:|.||||:||||:.:.:..:::    :|.||||||||||||
  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNK----KIKLQIWDTAGQERF 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            |::|||:||.|||.:|::|:|.||||....||:..:..:| |.|.:.:|.||||:|...|.||::
  Fly    71 RTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENA-SADVEKMLLGNKCELTDKRQVSKE 134

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIE 188
            :...|...|.:.::||||....||:||...|...:..:.|
  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 75/167 (45%)
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 75/166 (45%)

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