DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RAB15

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001295083.1 Gene:RAB15 / 376267 HGNCID:20150 Length:212 Species:Homo sapiens


Alignment Length:167 Identity:70/167 - (41%)
Similarity:107/167 - (64%) Gaps:5/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||||||.::||..||:..|||:|:||:.|.:..:.    .::.:||||||||||:
Human    10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDG----IKVRIQIWDTAGQERY 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            :::|..:||.|.|..|::|::||:|:.....|:|.:..:| .|....:|.|||.|..|.|.|.|:
Human    71 QTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA-PEGVQKILIGNKADEEQKRQVGRE 134

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVME 185
            |...|.:.|.:.:.||||||..|:||:...|...|::
Human   135 QGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQ 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 70/167 (42%)
RAB15NP_001295083.1 Rab15 9..172 CDD:206698 70/167 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 9/16 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..212
Blue background indicates that the domain is not in the aligned region.

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