Protein Alignment Rab27 and Rab4

DIOPT Version :9

• Sequence 1: NP_726743.1
• Gene: Rab27 / 31103
• FlyBaseID: FBgn0025382
• Length: 236
• Species: Drosophila melanogaster
• Sequence 2: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Alignment Length: 217
• Identity: 78/217 - (35%)
• Similarity: 119/217 - (54%)
• Gaps: 19/217 - (8%)

  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :||::|.:|.||:|||:.:.:.:|......|:|::|..:  :.|..|:  .:.||||||||||||
  Fly    10 KFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSR--IVNVGGK--SVKLQIWDTAGQERF 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVV--LCGNKCDLLQLRVVS 146
            ||:|.::||.|.|.||::|.||..||....|||:..||.|   .|::|  |.|||.||.:.|.|:
  Fly    71 RSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLA---SPNIVILLVGNKKDLEEARDVT 132

  Fly   147 RDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFSLLLTQSRCLPNIAY 211
            ..:.:...:...|.::||||.||.||:||.......::.:||....:.|        |....|.|
  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPE--------RIGSGIQY 189

  Fly   212 GQPEDLVRLHDRREEPCSRRNC 233
            |..  .:|....|:...::.:|
  Fly   190 GGA--ALRNLQTRQRSINKPDC 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab27	NP_726743.1	P-loop_NTPase	19..187	CDD:304359	68/169 (40%)
		RAB	20..186	CDD:197555	68/167 (41%)
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	68/165 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454574
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930