DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RAB37

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001006639.1 Gene:RAB37 / 326624 HGNCID:30268 Length:223 Species:Homo sapiens


Alignment Length:228 Identity:89/228 - (39%)
Similarity:125/228 - (54%) Gaps:27/228 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 APPEPEPLQLAGSGEQFLVLGDSGVGKTCLLYQYTDGRFHT-QFISTVGIDFREKRLLYNSRGRR 67
            :||......|.|   :.::|||:||||||.|.|:.||.|.: .||:|||||||.|.:..:.    
Human    19 SPPCSPSYDLTG---KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDG---- 76

  Fly    68 HRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSE-DPDVV 131
            .|:.||||||||||||||:|.|:||||...||::|:|::.||.....||:::  |.|:: |..::
Human    77 VRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQRDVVIM 139

  Fly   132 LCGNKCDLLQLRVVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREF 196
            |.|||.|:...||:..:....|.|.|.:|::||||.||.||:.|...:...:..|..:.|....|
Human   140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSF 204

  Fly   197 SLLLTQSRCLPNIAYGQPEDLVRLHDRREEPCS 229
                            |..|.|....:|...||
Human   205 ----------------QIRDYVESQKKRSSCCS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 76/169 (45%)
RAB37NP_001006639.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 2/3 (67%)
Rab26 31..220 CDD:206695 83/210 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 52..67 8/14 (57%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 85..102 13/16 (81%)

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