DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab9Fa

DIOPT Version :9

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_727471.1 Gene:Rab9Fa / 326230 FlyBaseID:FBgn0052671 Length:197 Species:Drosophila melanogaster


Alignment Length:188 Identity:73/188 - (38%)
Similarity:104/188 - (55%) Gaps:21/188 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.::||||||||||||.:::|.:|.|:..||||:|.||..:.: :..|..|: ||:|||:..|||
  Fly     9 KIIILGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEF-ADWRMGRM-LQVWDTSDDERF 71

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPD---VVLCGNKCDLLQLRVV 145
            :.|.....|.|.|.||::|:||.|||.....|:.::|...    ||   |:|.|||.|....|.|
  Fly    72 KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLC----PDKVTVLLVGNKSDDPNHRQV 132

  Fly   146 SRDQVAALCRRYRLPYIETSACTGANVKE-----AVELLVGRVMERIENAACNREFSL 198
            |..|......|..:.:.|.||.:|.||.:     |:::...|   |:.   || .|||
  Fly   133 SMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYR---RVH---CN-PFSL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop_NTPase 19..187 CDD:304359 67/175 (38%)
RAB 20..186 CDD:197555 67/173 (39%)
Rab9FaNP_727471.1 RAB 8..171 CDD:197555 66/167 (40%)
Rab 8..167 CDD:206640 65/163 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454382
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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