Protein Alignment Rab27 and ypt2

DIOPT Version :9

• Sequence 1: NP_726743.1
• Gene: Rab27 / 31103
• FlyBaseID: FBgn0025382
• Length: 236
• Species: Drosophila melanogaster
• Sequence 2: NP_594580.1
• Gene: ypt2 / 2543280
• PomBaseID: SPAC9E9.07c
• Length: 200
• Species: Schizosaccharomyces pombe
• Alignment Length: 194
• Identity: 82/194 - (42%)
• Similarity: 115/194 - (59%)
• Gaps: 12/194 - (6%)

  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||:|||.::::..|...||:|:||||:.:.:..:.:    ||.||||||||||||
pombe    11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGK----RIKLQIWDTAGQERF 71

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            |::|||:||.|||.||::|:|.:|||.....|.|.:..|| ||:...:|.|||||....|.||.:
pombe    72 RTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHA-SENVYKILIGNKCDCEDQRQVSFE 135

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMER-------IENAACNREFSLLLTQSRC 205
            |..||.....:.::|.||.|..||.||...|...:.::       ..|.|.|.:.....|..||
pombe   136 QGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNVDLGNDRTVKRC 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab27	NP_726743.1	P-loop_NTPase	19..187	CDD:304359	76/174 (44%)
		RAB	20..186	CDD:197555	76/165 (46%)
ypt2	NP_594580.1	Rab8_Rab10_Rab13_like	7..173	CDD:206659	76/166 (46%)
		Ras	11..172	CDD:278499	76/165 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910