DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab8b

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_775589.1 Gene:Rab8b / 235442 MGIID:2442982 Length:207 Species:Mus musculus


Alignment Length:196 Identity:82/196 - (41%)
Similarity:128/196 - (65%) Gaps:20/196 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||||||:::::..|:|.||||:||||:.:.:..:.:    :|.||||||||||||
Mouse    10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGK----KIKLQIWDTAGQERF 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            |::|||:||.|||.:|::|:|:||||....||:..:..|| |.|.:.::.|||||:...|.||::
Mouse    71 RTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHA-SSDVERMILGNKCDMNDKRQVSKE 134

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFS----------LLLTQS 203
            :...|...|.:.::||||.:..||:||...|...:|.::     ||:.:          :.:|:|
Mouse   135 RGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL-----NRKMNDSNSSGAGGPVKITES 194

  Fly   204 R 204
            |
Mouse   195 R 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 77/167 (46%)
Rab8bNP_775589.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 77/166 (46%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 8/13 (62%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 13/16 (81%)

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