DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab10

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_057885.1 Gene:Rab10 / 19325 MGIID:105066 Length:200 Species:Mus musculus


Alignment Length:168 Identity:72/168 - (42%)
Similarity:113/168 - (67%) Gaps:5/168 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||||:|::::|..|:|.||||:||||:.|.:....:    :|.||||||||||||
Mouse    11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK----KIKLQIWDTAGQERF 71

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            .::||::||.|||.:|::|:|:.|||...:.||..:..|| :||.:.:|.|||||:...|||.:.
Mouse    72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLLGNKCDMDDKRVVPKG 135

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMER 186
            :...:.|.:.:.:.||||....|:::|...|...::.:
Mouse   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 72/168 (43%)
Rab10NP_057885.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 72/166 (43%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 8/13 (62%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 11/16 (69%)

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