DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and aex-6

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_493376.1 Gene:aex-6 / 173223 WormBaseID:WBGene00000089 Length:215 Species:Caenorhabditis elegans


Alignment Length:223 Identity:112/223 - (50%)
Similarity:142/223 - (63%) Gaps:21/223 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSR-----GRRHRIHLQIWDTA 78
            :||.|||||||||..|::|||..|..||||||||||:||:::|.|.     ||..|:.||:||||
 Worm     9 KFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTA 73

  Fly    79 GQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLR 143
            ||||||||||||:||||||:||||:|:|:|||...:|||||:.|||.|.||:::||||.||...|
 Worm    74 GQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRR 138

  Fly   144 VVSRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFSLLLTQSRCLPN 208
            .||..:...|..:..|||.||||||..||:::|:.|:..||:||:.:.......|    |.|...
 Worm   139 QVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLLDLVMQRIQQSVETSSLPL----SECRGV 199

  Fly   209 IAYGQPEDLVRLHDRREEPCSRRNCRNC 236
            ...|.|.            .:...|.||
 Worm   200 SLDGDPS------------AASSYCANC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 102/172 (59%)
aex-6NP_493376.1 Rab27A 4..182 CDD:206700 102/172 (59%)

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