DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab8

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_321946.4 Gene:Rab8 / 1281958 VectorBaseID:AGAMI1_007866 Length:208 Species:Anopheles gambiae


Alignment Length:170 Identity:74/170 - (43%)
Similarity:115/170 - (67%) Gaps:5/170 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||||:|:::::..|:|.||||:||||:.:.:..:.:    :|.||||||||||||
Mosquito    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIDLDGK----KIKLQIWDTAGQERF 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148
            |::|||:||.|||.:|::|:|.||||....||:..:..:| :.|.:.:|.||||:|.:.|.|:|.
Mosquito    71 RTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENA-AADVEKMLLGNKCELNEKRQVTRV 134

  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIE 188
            :...|...|.:.::||||....||.:|...|...:..::|
Mosquito   135 RGEQLAVEYGIKFMETSAKASINVDDAFFTLARDIKCKME 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 73/167 (44%)
Rab8XP_321946.4 Rab8_Rab10_Rab13_like 6..172 CDD:206659 73/166 (44%)

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