DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and Rab35

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_311848.5 Gene:Rab35 / 1272924 VectorBaseID:AGAMI1_007430 Length:202 Species:Anopheles gambiae


Alignment Length:169 Identity:59/169 - (34%)
Similarity:99/169 - (58%) Gaps:12/169 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83
            :.|::|||||||:.||.:::|..|...:|:|:|:||:.:.::.|.    .|:.||||||||||||
Mosquito    10 KLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVING----ERVKLQIWDTAGQERF 70

  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDV---VLCGNKCDLLQLRVV 145
            |::|..:||...|.::::|:|:.:||.....||.::.::.     |:   ||.|||.|....:||
Mosquito    71 RTITNTYYRGTHGVIVVYDVTNGESFGNVKRWLQEIESNC-----DIVNKVLVGNKNDDPTRKVV 130

  Fly   146 SRDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVM 184
            :.:.......:..:...||||....||:|....:..:|:
Mosquito   131 TTEDAERFANQMEIKLFETSAKDNLNVEEMFLAITEQVL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 59/169 (35%)
Rab35XP_311848.5 P-loop containing Nucleoside Triphosphate Hydrolases 3..171 CDD:476819 59/169 (35%)

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