DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab27 and RabX4

DIOPT Version :10

Sequence 1:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_308884.2 Gene:RabX4 / 1270205 VectorBaseID:AGAMI1_005765 Length:219 Species:Anopheles gambiae


Alignment Length:176 Identity:78/176 - (44%)
Similarity:113/176 - (64%) Gaps:10/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERFRS 85
            ||||||.|||||::::|.|.|::..:|||:||||::|  |.|..|  ..|.|||||||||||||:
Mosquito    12 LVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQK--LINLDG--VPIKLQIWDTAGQERFRT 72

  Fly    86 LTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDV--VLCGNKCDL-LQLRVVSR 147
            ||||:||.|||.||::|:||.:||...:.||..::.:|   .|||  ||.||||:. ...|.|.:
Mosquito    73 LTTAYYRGAMGILLMYDVTSLESFNNLSYWLRNIQENA---APDVVKVLAGNKCECNPPQRAVDK 134

  Fly   148 DQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACN 193
            ::...:...:.:|:.|.|.....|:::|...|..::.|:.|:...|
Mosquito   135 ERGEKIAENFDMPFFEVSCKQNINIEDAFLTLARKIREQREHRGEN 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 76/168 (45%)
RabX4XP_308884.2 RAB 9..170 CDD:197555 75/164 (46%)

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