DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14780 and Ovch2

DIOPT Version :10

Sequence 1:NP_569920.2 Gene:CG14780 / 31102 FlyBaseID:FBgn0025383 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:286 Identity:82/286 - (28%)
Similarity:116/286 - (40%) Gaps:61/286 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SRIINGSVAKADETRHLVSIRLLRHDNNFGSGHICGGALIAPRKVLTAAHCLYNNQRKRFRRASE 95
            |||:.||..:.......||::..:.       |||||.:|:.:.|:|||||:.|.     ..|..
  Rat    50 SRIVGGSQVEKGSYPWQVSLKQKQK-------HICGGTIISSQWVITAAHCMANR-----NIALT 102

  Fly    96 FVVVLGTLNRFEHRNGTIVSQVSSMAYMHTFSPDS-MRDDVGILFLRTGLPMSPGGGVHLTVAPI 159
            ..|..|..:..:...|.....:.::.....||... |..|:.:|.:               |...
  Rat   103 LNVTAGEHDLSQAEPGEQTLAIETIIIHPQFSTKKPMNYDIALLKM---------------VGTF 152

  Fly   160 QLAGQITPP------------GKLCQVAGWGR-TEQSSLSNILLTANVSTIRHQTCR--MIYRSG 209
            |. ||...|            |.:|..||||| :|..||..:|...|:..:.|:.|.  |:....
  Rat   153 QF-GQFVRPVCLPEPGEQFNAGYICTTAGWGRLSEGGSLPQVLQQVNLPILTHEECEAVMLTLRN 216

  Fly   210 LLPG--MMCAGRLQGGTDSCQGDSGGPLVHEGR-----LVGVVSWGYGCA----------EPGLP 257
            .:.|  .:|.|...||.|:|||||||.|:.:.|     |.||.|||.||.          |.|.|
  Rat   217 PITGKTFLCTGSPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCGRSWRNNARKKEQGSP 281

  Fly   258 GVYVDVEYYRQWIEGRSGAPHSRLAT 283
            |::.|:.....||.......|.|.:|
  Rat   282 GIFTDLRRVLPWIHEHVQTGHRRKST 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14780NP_569920.2 Tryp_SPc 33..271 CDD:238113 76/270 (28%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 77/272 (28%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.