DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14780 and F11

DIOPT Version :10

Sequence 1:NP_569920.2 Gene:CG14780 / 31102 FlyBaseID:FBgn0025383 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:284 Identity:82/284 - (28%)
Similarity:125/284 - (44%) Gaps:47/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LHGCSYILFWFLLACAAADLQENQ-QSRIINGSVAKADETRHLVSIRLLRHDNNFGSGHICGGAL 69
            |||...|..:.|..|...::...: :.|:..|:.:...|....|::...:       ||:|||::
  Rat   360 LHGRGGISGYTLRLCKMDNVCTTKIRPRVFGGAASVHGEWPWQVTLHTTQ-------GHLCGGSI 417

  Fly    70 IAPRKVLTAAHCLYNNQRKRFRRASEFVVVLGTLNRFEHRNGTIVSQVSSMAYMHTFSPDSMRDD 134
            |..|.:||||||....:..:..|     |..|.:|:.|....|...:|..|.....::......|
  Rat   418 IGNRWILTAAHCFSGTETPKTLR-----VYGGIVNQSEINEDTTFFRVQEMIIHDQYTSAESGFD 477

  Fly   135 VGILFLRTGLPMS--------PGGG----VHLTVAPIQLAGQITPPGKLCQVAGWGRTE-QSSLS 186
            :.:|.|...:..:        |..|    ||..                |.|.|||.|: :..:.
  Rat   478 IALLKLEPAMNYTDFQRPICLPSKGDRNVVHTE----------------CWVTGWGYTKSRDEVQ 526

  Fly   187 NILLTANVSTIRHQTCRMIYRSGLLPG-MMCAGRLQGGTDSCQGDSGGPL--VHEG--RLVGVVS 246
            :.|..|.|..:.::.|:..||...:.. ::|||..:||.|:|:|||||||  .|.|  .|||:.|
  Rat   527 STLQKAKVPLVSNEECQTRYRKHKITNKVICAGYKEGGKDTCKGDSGGPLSCKHNGVWHLVGITS 591

  Fly   247 WGYGCAEPGLPGVYVDVEYYRQWI 270
            ||.||.:...||||.:|..|..||
  Rat   592 WGEGCGQKERPGVYTNVAKYVDWI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14780NP_569920.2 Tryp_SPc 33..271 CDD:238113 75/256 (29%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519 5/13 (38%)
Tryp_SPc 388..615 CDD:238113 73/254 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.