DRSC/TRiP Functional Genomics Resources

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Protein Alignment pck and kune

DIOPT Version :10

Sequence 1:NP_569919.2 Gene:pck / 31101 FlyBaseID:FBgn0013720 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_310372.3 Gene:kune / 1271551 VectorBaseID:AGAMI1_008269 Length:226 Species:Anopheles gambiae


Alignment Length:212 Identity:69/212 - (32%)
Similarity:110/212 - (51%) Gaps:21/212 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FGAIVTFASFFVLMMSFCSPYWIESYEE-TRASFKNMGLWQYCFKDF--VYPKYAFLKQFTGCHN 92
            |....|..:|..::::||||||:::..| ....|.|:|||:.|.::|  ::..|.:  .|.||..
Mosquito    10 FAVGFTAFAFLFILIAFCSPYWLQTDGELEHPKFTNLGLWELCLRNFQDIHRWYDY--PFNGCMW 72

  Fly    93 IFSHEYYVIREYLLPGWLMAVQGFVTMSFIIVFL--VLALLSLTIIRLPLKAVLQYEWLLVRLSY 155
            ||..|||:|.:|:|||:.:|||.|.|:.|.::.:  ::.|:.|:..|       ..:..::.|..
Mosquito    73 IFEEEYYIIHDYILPGFFIAVQFFFTLCFTLLLMGVIMTLMFLSCSR-------DNDRYIMLLLT 130

  Fly   156 MGTA--ISSLFMFLAVCIFGGCAYRRDWMMYPKFNVLGWSYALAVV-TFMLLGLAALILQREARQ 217
            .||.  :::|...:||..||.....||||...:.|.:|||:||.|| ||.|.....|.:....|.
Mosquito   131 NGTVLLLAALCGLIAVATFGCYGDSRDWMPNWEHNDMGWSFALGVVGTFALFPAGVLFIVEARRA 195

  Fly   218 AYDARGEQKNLVMQMEM 234
            .|    .:.|.:...||
Mosquito   196 TY----RRLNNIANTEM 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pckNP_569919.2 PMP22_Claudin 39..211 CDD:473919 62/179 (35%)
kuneXP_310372.3 Claudin_2 16..190 CDD:372799 62/182 (34%)

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