DRSC/TRiP Functional Genomics Resources

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Protein Alignment pck and sinu

DIOPT Version :10

Sequence 1:NP_569919.2 Gene:pck / 31101 FlyBaseID:FBgn0013720 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_003436626.2 Gene:sinu / 1271550 VectorBaseID:AGAMI1_004506 Length:245 Species:Anopheles gambiae


Alignment Length:219 Identity:57/219 - (26%)
Similarity:98/219 - (44%) Gaps:27/219 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GVVFGAIVTFASFFVLMMSFCSPYWIES-YEETRASFKNMGLWQYCFKDF--VYPKYAFLKQFTG 89
            ||...|:||      ::::|.:|.|:.| |..|.|....:|||.:||:..  |...|. .:.|.|
Mosquito    36 GVFVIALVT------VLVAFATPSWLVSDYRITGAKLDRLGLWTHCFRSLPDVNDDYQ-RRFFVG 93

  Fly    90 C---HNIFSHEYYVIREYLLPGWLMAVQGFVTMSFIIVFLVLALLSLTII------RLPLKAVLQ 145
            |   ::.|:..|..||.:|:|.:::|.|.|.|:..|.|.|.:.|:.|..:      :..:|.:..
Mosquito    94 CRWVYDPFTTGYDEIRGFLIPPFMVATQFFYTLCAIGVILAMVLVLLYFLCAGPDQKFFVKLIKA 158

  Fly   146 YEWLLVRLSYMGTAISSLFMFLAVCIFGGCAYRRDWMMYPKFNVLGWSYALAVVTFMLLGLAALI 210
            ..::.:..|..|:        :.|.:|.....:..||.....|..|||:.||.:..:...:|:.:
Mosquito   159 ISFITLAASICGS--------IGVIVFACFGNKDKWMPEHANNWFGWSFILACIGVVACAVASSL 215

  Fly   211 LQREARQAYDARGEQKNLVMQMEM 234
            ...||......|.:.|....|.:|
Mosquito   216 FFTEAHVQARKRRQLKESQTQFQM 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pckNP_569919.2 PMP22_Claudin 39..211 CDD:473919 46/183 (25%)
sinuXP_003436626.2 None

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