DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14778 and pxmp2

DIOPT Version :10

Sequence 1:NP_569918.1 Gene:CG14778 / 31100 FlyBaseID:FBgn0029580 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001006885.1 Gene:pxmp2 / 448721 XenbaseID:XB-GENE-951886 Length:193 Species:Xenopus tropicalis


Alignment Length:175 Identity:38/175 - (21%)
Similarity:79/175 - (45%) Gaps:16/175 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VFVTRY-------PIMRGMISYSLIWPTGSLIQQTVEGRRW-------GTYDWWRVLRFSMYGGL 62
            |.:.||       |::...::.:::...|:::.||::  :|       ...|....|||::||.|
 Frog    17 VLLLRYLQLLHSRPVLTKALTSAILSALGNILSQTIQ--KWRKEQKHPQNVDLRGPLRFAVYGLL 79

  Fly    63 FVAPTLYGWVKISSAMWPQTSLRTGVIKAAVETISYTPGAMTCFYFIMSLLESKTVEQAVAEVGK 127
            |..|..:.:..:...:.|.::...|:.:..:|.:...|..:..|:.:|:|||.|...:...::..
 Frog    80 FTGPLSHYFYLLLEQLVPSSAPLAGLQRLLIERLIIAPAFLLLFFLVMNLLEGKNFTKLNQKLKS 144

  Fly   128 KFLPTYKVALSVWPLVATINFTLIPERNRVPFISACSLCWTCFLA 172
            .:....|:...||.....||...:|.:.||.|.:..:..|..:|:
 Frog   145 SYWQALKLNWKVWTPFQFININYVPVQFRVLFANLVAFFWYAYLS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14778NP_569918.1 Mpv17_PMP22 111..172 CDD:461182 14/60 (23%)
pxmp2NP_001006885.1 Mpv17_PMP22 128..189 CDD:461182 14/60 (23%)

Return to query results.
Submit another query.