DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment O-fut2 and pad-2

DIOPT Version :9

Sequence 1:NP_569916.1 Gene:O-fut2 / 31098 FlyBaseID:FBgn0027791 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001255069.1 Gene:pad-2 / 259529 WormBaseID:WBGene00010757 Length:426 Species:Caenorhabditis elegans


Alignment Length:418 Identity:160/418 - (38%)
Similarity:226/418 - (54%) Gaps:48/418 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YILYDVNISEGFNLRRDVYIRMAVFVRRLQRRRRFRHVRLVLPPWPRLYHWHSQGLQQSGLPWSH 137
            ::|||||..||||||||||:|:|..||.|  |....:..||||||.||:||..   .:..|.|..
 Worm    43 FLLYDVNFGEGFNLRRDVYMRVANTVRSL--RDSGENYILVLPPWGRLHHWKR---MEVALSWRL 102

  Fly   138 FFDLASLRRYAPVLDYEEFLAEQRLFGNPGAPLVHVGHAFRLQHYEVMLEQGIFRDKFERVTDKP 202
            ||||.||.|:.||:::|:||.|..  ..|      :.....||||.........| |||:.:..|
 Worm   103 FFDLESLNRFIPVIEFEDFLDETE--NRP------IDQVIYLQHYAEGWGTEYVR-KFEKRSCLP 158

  Fly   203 CSEGSLS-------GGPLLQQAELRVGRFHCVRFQGSAGLLEKLLREA-IDEDTAGPEDVDDMRT 259
            .:|....       .|......::....|.||..||.:|.|:.||:.: ..|.|:...|      
 Worm   159 PAESHYKQVEEFKWKGWFYSYEDVYSRNFQCVSIQGDSGTLKDLLKHSNFSESTSIMVD------ 217

  Fly   260 YALLSAETVLHDHWGDEHFWQARRSMRFARRLEQVAADFRRQALDTTDASAGVQRPAMWELERPK 324
                .|||:||:|:|:..:|:||||||::..|..||..||::.||:.|.....:....|..|:|:
 Worm   218 ----RAETILHEHYGEVDYWKARRSMRYSNDLVDVADAFRKKYLDSDDKRDKTKLVDDWTKEKPR 278

  Fly   325 RNAKGGDYLCAHLRRGDFVRSRDATTPTLKAAAQQVKQLLRGFNMTTVFLATDATPYELMELKEL 389
            |.|.||.||..|.||.||:.:|.|..||:...|:.::.|.:..::..::|||||...|:.|||.|
 Worm   279 RTAIGGPYLGIHWRRRDFLYARRAQLPTIPGTAKILQDLCKKLDLQKIYLATDAPDQEVDELKAL 343

  Fly   390 F------YRFRLVHFAPESNVQRRELKDGGVAVVDQLVCAYARYFVGTYESTFTYRIYEEREILG 448
            .      |||          ...::|.||.:|::||.:||:|.||:|:||||||:||.|:|||:|
 Worm   344 LNGELEVYRF----------TDTQKLNDGQIAIIDQYLCAHAAYFIGSYESTFTFRIQEDREIIG 398

  Fly   449 FTQASTFNTFCKALGGSCSRNAVWPIVW 476
            |..::|||..|.....:|.:.|.|.||:
 Worm   399 FPISTTFNRLCPDTEPTCEQPAKWKIVY 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
O-fut2NP_569916.1 O-FucT-2 73..460 CDD:211384 154/400 (39%)
O-FucT 78..454 CDD:287252 148/389 (38%)
pad-2NP_001255069.1 O-FucT-2 43..411 CDD:211384 155/401 (39%)
O-FucT 53..404 CDD:287252 145/384 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166128
Domainoid 1 1.000 238 1.000 Domainoid score I1285
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12724
Inparanoid 1 1.050 261 1.000 Inparanoid score I1909
Isobase 1 0.950 - 0 Normalized mean entropy S3965
OMA 1 1.010 - - QHG58563
OrthoDB 1 1.010 - - D286553at33208
OrthoFinder 1 1.000 - - FOG0006576
OrthoInspector 1 1.000 - - oto17960
orthoMCL 1 0.900 - - OOG6_107032
Panther 1 1.100 - - LDO PTHR13398
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2701
SonicParanoid 1 1.000 - - X4817
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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