DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns3 and MTG1

DIOPT Version :9

Sequence 1:NP_001284779.1 Gene:Ns3 / 31097 FlyBaseID:FBgn0266284 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_013815.1 Gene:MTG1 / 855122 SGDID:S000004703 Length:367 Species:Saccharomyces cerevisiae


Alignment Length:433 Identity:85/433 - (19%)
Similarity:141/433 - (32%) Gaps:178/433 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 RVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEG 234
            :::.:.::::::.|.|.||..|:...:|..:: |...|.:::..:.||:...:            
Yeast    47 KLLPQMNMIIELRDIRAPLSTRNVVFDRIARK-EHDVMKLVVYTRKDLMPGNK------------ 98

  Fly   235 IRTAFYSATLVEEELKREAEECLDSFPEVQQLRRAVEEIKQS---LD-----SVEDALNVIE-QK 290
                                      |.:.:|:...||:.:.   ||     .|.:.|.::| |.
Yeast    99 --------------------------PYIGKLKNWHEELGEKFILLDCRNKTDVRNLLKILEWQN 137

  Fly   291 YKTIPETQNDELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTIN 355
            |:.  ||....||                         .|.|..       :.|.||||||:.||
Yeast   138 YEL--ETNGGYLP-------------------------MGYRAL-------ITGMPNVGKSTLIN 168

  Fly   356 SLMTV-----------KKVS-VSATPGKTKRFQTLF--------LDKDILLCDCPGLVMPSFVLT 400
            ||.|:           |||: ..|..|.|:....:.        ...:|.|.|.||:.:|.    
Yeast   169 SLRTIFHNQVNMGRKFKKVAKTGAEAGVTRATSEVIRVTSRNTESRNEIYLIDTPGIGVPG---- 229

  Fly   401 KADMLLNGILPIDQMRDHVPAVNL-LCERIPRHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAY 464
                         ::.||...:.| ||..:..::::         |:...|          .|.|
Yeast   230 -------------RVSDHNRMLGLALCGSVKNNLVD---------PIFQAD----------YLLY 262

  Fly   465 GYNRGFMTSNGQPDQARSARYVLKDYVNGRL-LYAMSPPSVPQTEYHTFPERQRRVIEESQLPGQ 528
            ..|                   |::..:||. ||..|..|.....|...   :|..:.:||    
Yeast   263 LMN-------------------LQNLNDGRTELYPGSTNSPTNDIYDVL---RRLQVNKSQ---- 301

  Fly   529 QQRAMRINKSTSKELDNQFFSDKPTHAHVKGRTNFPNVRLAND 571
                  ..|||:.|..|::      ..|.||....|.|.|.||
Yeast   302 ------NEKSTAIEWTNKW------RLHGKGIIFDPEVLLNND 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns3NP_001284779.1 RbgA 161..524 CDD:224083 70/384 (18%)
HSR1_MMR1 164..395 CDD:206750 50/253 (20%)
p10 <270..312 CDD:177631 13/50 (26%)
P-loop_NTPase 313..>357 CDD:304359 11/43 (26%)
MTG1NP_013815.1 RbgA 18..367 CDD:224083 85/433 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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